Sample	Filename	File type	Encoding	Total Sequences	Total Bases	Sequences flagged as poor quality	Sequence length	%GC	total_deduplicated_percentage	avg_sequence_length	median_sequence_length	basic_statistics	per_base_sequence_quality	per_tile_sequence_quality	per_sequence_quality_scores	per_base_sequence_content	per_sequence_gc_content	per_base_n_content	sequence_length_distribution	sequence_duplication_levels	overrepresented_sequences	adapter_content
Sk_22_001_1_1_S1_L001_R1_001	Sk_22_001_1_1_S1_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23485203.0	3.5 Gbp	0.0	150.0	61.0	86.6351417994672	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_1_1_S1_L001_R2_001	Sk_22_001_1_1_S1_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23485203.0	3.5 Gbp	0.0	150.0	61.0	86.88731813950554	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_1_2_S2_L001_R1_001	Sk_22_001_1_2_S2_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23218769.0	3.4 Gbp	0.0	150.0	60.0	87.95183441854161	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_1_2_S2_L001_R2_001	Sk_22_001_1_2_S2_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23218769.0	3.4 Gbp	0.0	150.0	60.0	88.26513020271516	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_1_3_S3_L001_R1_001	Sk_22_001_1_3_S3_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20564005.0	3 Gbp	0.0	150.0	61.0	88.25540087819255	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_1_3_S3_L001_R2_001	Sk_22_001_1_3_S3_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20564005.0	3 Gbp	0.0	150.0	61.0	88.56539365169456	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_2_1_S4_L001_R1_001	Sk_22_001_2_1_S4_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23512632.0	3.5 Gbp	0.0	150.0	60.0	87.43024240341207	150.0	150	pass	pass	pass	pass	pass	fail	pass	pass	pass	pass	fail
Sk_22_001_2_1_S4_L001_R2_001	Sk_22_001_2_1_S4_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23512632.0	3.5 Gbp	0.0	150.0	60.0	87.84247369220502	150.0	150	pass	pass	pass	pass	pass	fail	pass	pass	pass	pass	fail
Sk_22_001_2_2_S5_L001_R1_001	Sk_22_001_2_2_S5_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	27801049.0	4.1 Gbp	0.0	150.0	60.0	85.73506429778224	150.0	150	pass	pass	pass	pass	pass	fail	pass	pass	pass	pass	fail
Sk_22_001_2_2_S5_L001_R2_001	Sk_22_001_2_2_S5_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	27801049.0	4.1 Gbp	0.0	150.0	60.0	86.04696317681417	150.0	150	pass	pass	pass	pass	pass	fail	pass	pass	pass	pass	fail
Sk_22_001_2_3_S6_L001_R1_001	Sk_22_001_2_3_S6_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	19862178.0	2.9 Gbp	0.0	150.0	60.0	88.77653793937371	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_2_3_S6_L001_R2_001	Sk_22_001_2_3_S6_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	19862178.0	2.9 Gbp	0.0	150.0	60.0	89.10146630870554	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_3_1_S7_L001_R1_001	Sk_22_001_3_1_S7_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	25585383.0	3.8 Gbp	0.0	150.0	60.0	87.91844186934587	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_3_1_S7_L001_R2_001	Sk_22_001_3_1_S7_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	25585383.0	3.8 Gbp	0.0	150.0	60.0	88.13122495275128	150.0	150	pass	pass	pass	pass	warn	warn	pass	pass	pass	pass	fail
Sk_22_001_3_2_S8_L001_R1_001	Sk_22_001_3_2_S8_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	22663920.0	3.3 Gbp	0.0	150.0	60.0	88.2804317600798	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_3_2_S8_L001_R2_001	Sk_22_001_3_2_S8_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	22663920.0	3.3 Gbp	0.0	150.0	60.0	88.54245305997335	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_3_3_S9_L001_R1_001	Sk_22_001_3_3_S9_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23037458.0	3.4 Gbp	0.0	150.0	60.0	88.57129284649116	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_3_3_S9_L001_R2_001	Sk_22_001_3_3_S9_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23037458.0	3.4 Gbp	0.0	150.0	60.0	88.77043121484569	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_4_1_S10_L001_R1_001	Sk_22_001_4_1_S10_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20318399.0	3 Gbp	0.0	150.0	60.0	88.62892164949936	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_4_1_S10_L001_R2_001	Sk_22_001_4_1_S10_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20318399.0	3 Gbp	0.0	150.0	60.0	88.80650496916262	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_4_2_S11_L001_R1_001	Sk_22_001_4_2_S11_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	14294956.0	2.1 Gbp	0.0	150.0	60.0	89.971632132332	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_4_2_S11_L001_R2_001	Sk_22_001_4_2_S11_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	14294956.0	2.1 Gbp	0.0	150.0	60.0	90.17592048769095	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_4_3_S12_L001_R1_001	Sk_22_001_4_3_S12_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	21868082.0	3.2 Gbp	0.0	150.0	60.0	88.66204018083408	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_4_3_S12_L001_R2_001	Sk_22_001_4_3_S12_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	21868082.0	3.2 Gbp	0.0	150.0	60.0	88.83812359821334	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_5_1_S13_L001_R1_001	Sk_22_001_5_1_S13_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	25738528.0	3.8 Gbp	0.0	150.0	60.0	88.03521552221366	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_5_1_S13_L001_R2_001	Sk_22_001_5_1_S13_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	25738528.0	3.8 Gbp	0.0	150.0	60.0	88.2653462445762	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_5_2_S14_L001_R1_001	Sk_22_001_5_2_S14_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20570012.0	3 Gbp	0.0	150.0	60.0	88.04747944566816	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_5_2_S14_L001_R2_001	Sk_22_001_5_2_S14_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20570012.0	3 Gbp	0.0	150.0	60.0	88.4856947506305	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_5_3_S15_L001_R1_001	Sk_22_001_5_3_S15_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20500674.0	3 Gbp	0.0	150.0	60.0	88.0330835028435	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_5_3_S15_L001_R2_001	Sk_22_001_5_3_S15_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20500674.0	3 Gbp	0.0	150.0	60.0	88.20708897936301	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_7_1_S16_L001_R1_001	Sk_22_001_7_1_S16_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	21329360.0	3.1 Gbp	0.0	150.0	59.0	88.76594286901192	150.0	150	pass	pass	pass	pass	pass	fail	pass	pass	pass	pass	fail
Sk_22_001_7_1_S16_L001_R2_001	Sk_22_001_7_1_S16_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	21329360.0	3.1 Gbp	0.0	150.0	59.0	89.01826023938806	150.0	150	pass	pass	pass	pass	pass	fail	pass	pass	pass	pass	fail
Sk_22_001_7_2_S17_L001_R1_001	Sk_22_001_7_2_S17_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	25685672.0	3.8 Gbp	0.0	150.0	60.0	88.03880819920954	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_7_2_S17_L001_R2_001	Sk_22_001_7_2_S17_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	25685672.0	3.8 Gbp	0.0	150.0	60.0	88.3751445571515	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_7_3_S18_L001_R1_001	Sk_22_001_7_3_S18_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20011711.0	3 Gbp	0.0	150.0	60.0	87.55486095893302	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_7_3_S18_L001_R2_001	Sk_22_001_7_3_S18_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20011711.0	3 Gbp	0.0	150.0	59.0	87.77738366584018	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_8_1_S19_L001_R1_001	Sk_22_001_8_1_S19_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	16990129.0	2.5 Gbp	0.0	150.0	59.0	88.73161160811375	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_8_1_S19_L001_R2_001	Sk_22_001_8_1_S19_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	16990129.0	2.5 Gbp	0.0	150.0	59.0	89.04358598542309	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_8_2_S20_L001_R1_001	Sk_22_001_8_2_S20_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	18686361.0	2.8 Gbp	0.0	150.0	61.0	89.27920023987987	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_8_2_S20_L001_R2_001	Sk_22_001_8_2_S20_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	18686361.0	2.8 Gbp	0.0	150.0	61.0	89.698828227299	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_8_3_S21_L001_R1_001	Sk_22_001_8_3_S21_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23801475.0	3.5 Gbp	0.0	150.0	60.0	88.0423818227778	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_8_3_S21_L001_R2_001	Sk_22_001_8_3_S21_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23801475.0	3.5 Gbp	0.0	150.0	60.0	88.60195580029348	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_8_4_S22_L001_R1_001	Sk_22_001_8_4_S22_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	24934419.0	3.7 Gbp	0.0	150.0	62.0	87.51560249059753	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_8_4_S22_L001_R2_001	Sk_22_001_8_4_S22_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	24934419.0	3.7 Gbp	0.0	150.0	62.0	87.97563979347771	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_C6_S23_L001_R1_001	Sk_22_001_C6_S23_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2224.0	333.6 kbp	0.0	150.0	60.0	47.43705035971223	150.0	150	pass	pass	warn	pass	fail	fail	pass	pass	fail	fail	fail
Sk_22_001_C6_S23_L001_R2_001	Sk_22_001_C6_S23_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2224.0	333.6 kbp	0.0	150.0	61.0	64.83812949640287	150.0	150	pass	pass	fail	pass	fail	fail	pass	pass	warn	fail	fail
Sk_22_001_EB_S24_L001_R1_001	Sk_22_001_EB_S24_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	10526.0	1.5 Mbp	0.0	150.0	52.0	76.47729431882956	150.0	150	pass	pass	warn	pass	fail	warn	pass	pass	pass	fail	fail
Sk_22_001_EB_S24_L001_R2_001	Sk_22_001_EB_S24_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	10526.0	1.5 Mbp	0.0	150.0	52.0	81.14193425802773	150.0	150	pass	pass	warn	pass	fail	warn	pass	pass	pass	fail	fail
Sk_22_001_NC10_S27_L001_R1_001	Sk_22_001_NC10_S27_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	273364.0	41 Mbp	0.0	150.0	48.0	82.00610739171287	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_NC10_S27_L001_R2_001	Sk_22_001_NC10_S27_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	273364.0	41 Mbp	0.0	150.0	48.0	82.50774334438678	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_NC12_S28_L001_R1_001	Sk_22_001_NC12_S28_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	571721.0	85.7 Mbp	0.0	150.0	49.0	80.47705324360928	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Sk_22_001_NC12_S28_L001_R2_001	Sk_22_001_NC12_S28_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	571721.0	85.7 Mbp	0.0	150.0	49.0	80.71558619963956	150.0	150	pass	pass	pass	pass	warn	pass	pass	pass	pass	pass	fail
Sk_22_001_NC6_S25_L001_R1_001	Sk_22_001_NC6_S25_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3348064.0	502.2 Mbp	0.0	150.0	46.0	77.9937055862676	150.0	150	pass	pass	pass	pass	pass	pass	pass	pass	pass	pass	fail
Sk_22_001_NC6_S25_L001_R2_001	Sk_22_001_NC6_S25_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3348064.0	502.2 Mbp	0.0	150.0	46.0	78.62067805489886	150.0	150	pass	pass	pass	pass	pass	pass	pass	pass	pass	pass	fail
Sk_22_001_NC8_S26_L001_R1_001	Sk_22_001_NC8_S26_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1050966.0	157.6 Mbp	0.0	150.0	48.0	80.01147813765968	150.0	150	pass	pass	pass	pass	pass	pass	pass	pass	pass	pass	fail
Sk_22_001_NC8_S26_L001_R2_001	Sk_22_001_NC8_S26_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1050966.0	157.6 Mbp	0.0	150.0	48.0	80.79426741691911	150.0	150	pass	pass	pass	pass	pass	warn	pass	pass	pass	pass	fail
Undetermined_S0_L001_R1_001	Undetermined_S0_L001_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	26225157.0	3.9 Gbp	0.0	150.0	54.0	89.30445115748829	150.0	150	pass	pass	pass	pass	pass	fail	pass	pass	pass	pass	fail
Undetermined_S0_L001_R2_001	Undetermined_S0_L001_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	26225157.0	3.9 Gbp	0.0	150.0	55.0	87.02567592385917	150.0	150	pass	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail