##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R2_012.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5786205 34.0 31.0 34.0 31.0 34.0 2 32.7296185 34.0 31.0 34.0 31.0 34.0 3 32.762342 34.0 31.0 34.0 31.0 34.0 4 36.161945 37.0 37.0 37.0 35.0 37.0 5 36.1659805 37.0 37.0 37.0 35.0 37.0 6 36.1585515 37.0 37.0 37.0 35.0 37.0 7 36.13688425 37.0 37.0 37.0 35.0 37.0 8 36.115278 37.0 37.0 37.0 35.0 37.0 9 37.87102 39.0 39.0 39.0 35.0 39.0 10-14 38.12479825 39.4 38.4 39.4 35.2 39.4 15-19 39.235206149999996 41.0 39.4 41.0 36.0 41.0 20-24 38.9270401 41.0 39.0 41.0 35.6 41.0 25-29 38.5530743 40.0 38.2 41.0 34.8 41.0 30-34 37.8148592 39.8 37.0 41.0 33.2 41.0 35-39 36.719301 38.6 35.0 40.6 32.0 41.0 40-44 35.781710999999994 36.4 35.0 39.8 31.0 41.0 45-49 34.7998942 35.0 34.6 38.4 30.4 40.8 50-54 33.469259 34.8 33.2 35.4 28.0 39.2 55-59 33.6000337 35.0 34.0 35.0 30.0 38.0 60-64 33.296623700000005 35.0 34.0 35.0 29.4 36.2 65-69 32.9897557 35.0 34.0 35.0 29.0 35.0 70-74 32.68214759999999 35.0 33.0 35.0 28.4 35.0 75-79 32.39498625 35.0 33.0 35.0 27.0 35.0 80-84 32.062208850000005 35.0 33.0 35.0 27.0 35.0 85-89 31.705959999999997 35.0 33.0 35.0 24.6 35.0 90-94 31.268162650000004 35.0 32.8 35.0 23.8 35.0 95-99 30.609106849999996 35.0 31.6 35.0 20.2 35.0 100-101 29.418736125000002 34.0 30.0 35.0 8.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6691.0 3 1434.0 4 2058.0 5 2666.0 6 3355.0 7 4010.0 8 4811.0 9 5369.0 10 5545.0 11 5892.0 12 6244.0 13 6154.0 14 6292.0 15 6291.0 16 6709.0 17 7547.0 18 8348.0 19 9422.0 20 10817.0 21 12986.0 22 15569.0 23 18695.0 24 22602.0 25 26752.0 26 32981.0 27 40026.0 28 48730.0 29 59915.0 30 75004.0 31 95600.0 32 126030.0 33 178802.0 34 293531.0 35 692494.0 36 1342139.0 37 665827.0 38 124384.0 39 18175.0 40 103.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.43919863464935 19.01642609308995 17.58904817034556 28.95532710191514 2 32.1546765848222 22.71505504145938 19.495516261714798 25.63475211200363 3 29.764011526327682 20.42195146422242 20.118205657928677 29.695831351521218 4 31.738122551920245 18.973967631240843 18.766124018109693 30.52178579872922 5 31.66569154238314 19.15660212502886 19.1143787015847 30.0633276310033 6 30.950656260677334 18.453889164307544 17.82106547499046 32.77438910002466 7 32.83088956698983 18.233590424360376 18.309901808847613 30.625618199802172 8 30.36432595105522 18.96605717458452 19.08481313084408 31.584803743516172 9 31.05121312696922 17.97006291474961 18.84432956031784 32.134394397963334 10-14 31.184739719419944 18.842834941313154 18.787215284497847 31.18521005476905 15-19 31.247574516749673 18.624078766686676 18.72365992738411 31.404686789179546 20-24 31.24914743033565 18.68097374648186 18.726148996287588 31.343729826894908 25-29 31.281651419791988 18.78444841294119 18.687646062071263 31.246254105195558 30-34 31.362164653786273 18.618740828652026 18.59817018879454 31.420924328767164 35-39 31.322922280561993 18.696256044749028 18.681244528249714 31.299577146439265 40-44 31.38956328342619 18.731937765935154 18.610911857548135 31.26758709309052 45-49 31.435077311532993 18.57604267433985 18.5443655929283 31.44451442119886 50-54 31.31125883330875 18.65428149036462 18.657302557858817 31.377157118467814 55-59 31.36628289476152 18.71724351979506 18.623547302286603 31.29292628315682 60-64 31.44202971630446 18.59307778896167 18.517252777587917 31.447639717145957 65-69 31.30530074113156 18.694484258416942 18.640529145111202 31.359685855340295 70-74 31.40465 18.728875000000002 18.57714 31.289335 75-79 31.442607329141868 18.60022617530381 18.523654379695202 31.43351211585912 80-84 31.33142592461377 18.679387569687034 18.63871883019644 31.350467675502763 85-89 31.448749717312456 18.70662280599342 18.578942786841417 31.2656846898527 90-94 31.504145752072876 18.56531428265714 18.501499250749625 31.429040714520358 95-99 31.368016657116026 18.654949881642068 18.617142348537353 31.359891112704553 100-101 31.602906352314342 18.718836939064904 18.521408385350938 31.15684832326982 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.39452573656449 2 57.78942869682583 3 59.4598428778489 4 62.25990835064946 5 61.72901917338643 6 63.725045360702005 7 63.456507766792015 8 61.94912969457139 9 63.18560752493255 10-14 62.369949774188996 15-19 62.652261305929215 20-24 62.59287725723055 25-29 62.527905524987546 30-34 62.78308898255344 35-39 62.622499427001266 40-44 62.65715037651671 45-49 62.87959173273185 50-54 62.688415951776555 55-59 62.65920917791834 60-64 62.889669433450415 65-69 62.66498659647185 70-74 62.693985 75-79 62.87611944500099 80-84 62.68189360011653 85-89 62.714434407165164 90-94 62.93318646659324 95-99 62.727907769820575 100-101 62.759754675584155 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 117.0 1 70.5 2 24.0 3 26.0 4 29.5 5 35.0 6 32.5 7 32.5 8 45.5 9 60.0 10 59.0 11 66.5 12 98.0 13 119.0 14 145.5 15 192.0 16 242.0 17 307.0 18 375.0 19 432.5 20 515.5 21 622.0 22 775.0 23 980.5 24 1208.5 25 1466.5 26 1780.5 27 2185.0 28 2702.5 29 3207.5 30 3765.5 31 4477.5 32 5268.0 33 6175.5 34 7044.5 35 7812.5 36 8669.0 37 9601.0 38 10319.5 39 11125.0 40 12086.0 41 13046.5 42 14207.5 43 15586.0 44 17231.5 45 19405.5 46 22404.0 47 26225.5 48 30761.0 49 36408.5 50 43031.5 51 50283.5 52 58780.0 53 68116.5 54 77957.5 55 88601.5 56 99188.0 57 110071.0 58 122107.0 59 134530.5 60 146381.5 61 158617.5 62 170673.0 63 182041.5 64 192355.5 65 200285.5 66 205119.5 67 206292.5 68 203485.0 69 196118.5 70 184436.5 71 167976.5 72 148521.0 73 126772.0 74 103686.0 75 81403.0 76 60766.5 77 42822.0 78 28104.0 79 17202.5 80 9952.5 81 5532.0 82 3047.5 83 1814.0 84 1164.0 85 772.0 86 546.5 87 411.5 88 322.5 89 256.0 90 215.0 91 170.0 92 130.5 93 115.0 94 92.5 95 78.5 96 56.0 97 31.0 98 25.0 99 17.0 100 7.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.084275 2 0.08895 3 0.080925 4 0.081125 5 0.055475000000000003 6 0.05115 7 0.1132 8 0.131325 9 0.15059999999999998 10-14 0.0713 15-19 0.07146 20-24 0.044825000000000004 25-29 0.04891500000000001 30-34 0.07603 35-39 0.04341 40-44 0.029670000000000002 45-49 0.022355 50-54 0.035335 55-59 0.022645 60-64 1.4999999999999999E-5 65-69 2.0999999999999998E-4 70-74 0.0 75-79 0.002345 80-84 0.009195 85-89 1.4999999999999999E-5 90-94 4.9999999999999996E-5 95-99 0.0067 100-101 0.0018 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2044223195185885 #Duplication Level Relative count 1 100.0 2 0.16076767818417664 3 0.0020033355536969054 4 0.0010016677768484527 5 5.008338884242263E-4 6 0.001502501665272679 7 0.0 8 0.0 9 0.0 10++ 0.0010016677768484527 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 323240 3.616535 3.8812594 60-64 TTTTT 294695 3.3836818 3.6882625 90-94 GATCG 1281700 3.0751772 4.1804557 1 CGATC 1273180 3.0699136 3.4735298 1 >>END_MODULE