##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R2_008.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.59780875 34.0 31.0 34.0 31.0 34.0 2 32.753122 34.0 31.0 34.0 31.0 34.0 3 32.77924825 34.0 31.0 34.0 31.0 34.0 4 36.1591225 37.0 37.0 37.0 35.0 37.0 5 36.15630725 37.0 37.0 37.0 35.0 37.0 6 36.16547 37.0 37.0 37.0 35.0 37.0 7 36.16806275 37.0 37.0 37.0 35.0 37.0 8 36.140277 37.0 37.0 37.0 35.0 37.0 9 37.895121 39.0 39.0 39.0 35.0 39.0 10-14 38.1802825 39.4 39.2 39.4 35.4 39.4 15-19 39.3454713 41.0 40.0 41.0 36.6 41.0 20-24 39.1119417 41.0 39.0 41.0 35.6 41.0 25-29 38.707593900000006 40.2 38.4 41.0 35.0 41.0 30-34 38.017439949999996 40.0 37.0 41.0 33.6 41.0 35-39 36.98434295 38.6 35.0 40.8 32.6 41.0 40-44 36.00876195 36.4 35.0 39.8 31.8 41.0 45-49 35.045541650000004 35.0 35.0 38.4 31.0 41.0 50-54 33.7358027 34.8 33.2 35.6 28.8 39.2 55-59 33.86396975 35.0 34.8 35.0 30.8 38.0 60-64 33.5646141 35.0 34.4 35.0 30.4 36.2 65-69 33.28010355 35.0 34.0 35.0 30.0 35.0 70-74 33.015720200000004 35.0 34.0 35.0 29.2 35.0 75-79 32.74627155 35.0 33.4 35.0 29.0 35.0 80-84 32.4716978 35.0 33.0 35.0 27.4 35.0 85-89 32.17586885000001 35.0 33.0 35.0 27.0 35.0 90-94 31.804969149999998 35.0 33.0 35.0 25.8 35.0 95-99 31.22550855 35.0 33.0 35.0 23.8 35.0 100-101 30.143737125 34.0 31.5 35.0 18.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 7637.0 3 1112.0 4 1467.0 5 1885.0 6 2571.0 7 3114.0 8 3812.0 9 4251.0 10 4440.0 11 4667.0 12 4820.0 13 4922.0 14 4991.0 15 5093.0 16 5550.0 17 6242.0 18 6902.0 19 8018.0 20 9198.0 21 10987.0 22 13517.0 23 16096.0 24 19589.0 25 24055.0 26 28805.0 27 35665.0 28 43604.0 29 54205.0 30 68084.0 31 86473.0 32 114971.0 33 163389.0 34 267723.0 35 656735.0 36 1421193.0 37 730172.0 38 134277.0 39 19646.0 40 122.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.40564987378027 19.020546908743984 17.57515811288724 28.998645104588505 2 32.10233827516726 22.7027411608529 19.506786952836922 25.688133611142916 3 29.78913847188271 20.3731436384561 20.140793133146985 29.696924756514203 4 31.7160254504311 18.95844704377076 18.77917385041096 30.546353655387176 5 31.64102993187531 19.147511973301253 19.15074359975129 30.060714495072144 6 30.961144713174747 18.447345231191846 17.804015946457387 32.787494109176016 7 32.837887758514015 18.281789040146883 18.27280399486626 30.607519206472837 8 30.366416643862593 18.9938883407287 19.070925641854412 31.5687693735543 9 31.01658511959361 17.991665746397995 18.812019535238026 32.17972959877037 10-14 31.181690210131386 18.8453861129715 18.804430077803953 31.16849359909316 15-19 31.259557441930507 18.614898197652664 18.72461721817997 31.400927142236856 20-24 31.18831150088649 18.70120439751386 18.763318407862393 31.34716569373726 25-29 31.28168290487054 18.79162373085183 18.696315850734873 31.230377513542756 30-34 31.36189866093052 18.63883947545376 18.59668813467531 31.402573728940407 35-39 31.249385928103514 18.726461411071686 18.69778137699782 31.32637128382698 40-44 31.36599444788492 18.72728846708102 18.62736159808574 31.27935548694832 45-49 31.428370814402008 18.58973554315747 18.553707867461164 31.42818577497936 50-54 31.28340356166934 18.67250562521143 18.6861813054052 31.357909507714027 55-59 31.364782340719362 18.70698291963296 18.652930776995923 31.27530396265176 60-64 31.441445 18.58606 18.547325 31.42517 65-69 31.294275 18.69049 18.677585 31.33765 70-74 31.382915 18.741385 18.615955 31.259745 75-79 31.434506253541628 18.58813166865562 18.5524310028382 31.424931074964547 80-84 31.31876487121403 18.68755827785722 18.669781453066157 31.32389539786259 85-89 31.407885 18.71949 18.61075 31.261875 90-94 31.473072589229034 18.585352434140972 18.54294741717897 31.398627559451025 95-99 31.33538254952214 18.662627434756736 18.662697435309738 31.33929258041139 100-101 31.56261238810879 18.744295824940753 18.58322573451274 31.109866052437724 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.40429497836877 2 57.79047188631018 3 59.486063228396915 4 62.262379105818276 5 61.70174442694746 6 63.74863882235077 7 63.44540696498685 8 61.93518601741689 9 63.19631471836398 10-14 62.350183809224546 15-19 62.660484584167364 20-24 62.535477194623745 25-29 62.5120604184133 30-34 62.76447238987093 35-39 62.575757211930494 40-44 62.64534993483324 45-49 62.85655658938136 50-54 62.641313069383365 55-59 62.64008630337111 60-64 62.866615 65-69 62.631925 70-74 62.64265999999999 75-79 62.859437328506175 80-84 62.64266026907662 85-89 62.66976 90-94 62.871700148680056 95-99 62.67467512993352 100-101 62.672478440546506 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 108.0 1 71.5 2 31.5 3 27.5 4 29.5 5 32.5 6 39.0 7 42.5 8 44.0 9 59.5 10 74.0 11 79.5 12 92.5 13 125.5 14 149.0 15 174.5 16 238.0 17 297.5 18 340.0 19 428.0 20 540.0 21 654.0 22 811.0 23 1001.5 24 1206.5 25 1435.0 26 1755.5 27 2155.0 28 2598.0 29 3116.5 30 3786.0 31 4549.5 32 5292.5 33 6139.0 34 7085.5 35 7979.5 36 8758.5 37 9546.5 38 10345.0 39 11178.5 40 12160.0 41 13198.5 42 14233.5 43 15467.0 44 17317.5 45 19528.0 46 22342.5 47 26142.5 48 30740.0 49 36349.5 50 42723.5 51 50277.0 52 59249.0 53 68521.0 54 78131.5 55 88159.0 56 99139.5 57 110666.5 58 122486.5 59 134457.0 60 146576.5 61 159094.0 62 171103.5 63 182590.0 64 192720.5 65 200472.5 66 206050.0 67 208033.5 68 204667.0 69 196772.0 70 184166.0 71 167825.5 72 148500.0 73 126453.5 74 103683.0 75 81284.5 76 60208.5 77 41773.0 78 27144.5 79 16428.0 80 9217.0 81 4919.5 82 2574.0 83 1393.0 84 789.0 85 500.5 86 345.5 87 245.0 88 194.0 89 150.5 90 112.0 91 93.5 92 65.0 93 45.5 94 46.5 95 34.5 96 23.5 97 19.0 98 14.0 99 11.5 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.2137 2 0.20742500000000003 3 0.20465000000000003 4 0.194225 5 0.20504999999999998 6 0.109475 7 0.11180000000000001 8 0.14577500000000002 9 0.165025 10-14 0.087985 15-19 0.081135 20-24 0.046704999999999997 25-29 0.039744999999999996 30-34 0.086215 35-39 0.052419999999999994 40-44 0.021885 45-49 0.021305 50-54 0.041534999999999996 55-59 0.031715 60-64 0.0 65-69 0.0 70-74 0.0 75-79 0.001865 80-84 0.010265 85-89 0.0 90-94 3.9999999999999996E-5 95-99 7.9E-4 100-101 0.0047125 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2508156504968763 #Duplication Level Relative count 1 100.0 2 0.168298730246187 3 0.003506223546795562 4 0.0 5 0.0 6 5.008890781136517E-4 7 0.0010017781562273035 8 0.0 9 0.0 10++ 0.004508001703022866 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 313580 3.498918 3.9720552 60-64 TTTTT 287670 3.2770338 3.7274249 95-97 GATCG 1283745 3.0802364 4.081683 1 CGATC 1273650 3.0699985 3.4938533 1 >>END_MODULE