##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R2_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.63159225 34.0 31.0 34.0 31.0 34.0 2 32.77743375 34.0 31.0 34.0 31.0 34.0 3 32.821003 34.0 31.0 34.0 31.0 34.0 4 36.19806625 37.0 37.0 37.0 35.0 37.0 5 36.2065025 37.0 37.0 37.0 35.0 37.0 6 36.19076925 37.0 37.0 37.0 35.0 37.0 7 36.19307325 37.0 37.0 37.0 35.0 37.0 8 36.17515875 37.0 37.0 37.0 35.0 37.0 9 37.9511365 39.0 39.0 39.0 37.0 39.0 10-14 38.2385449 39.4 39.2 39.4 37.0 39.4 15-19 39.40647675 41.0 40.0 41.0 37.0 41.0 20-24 39.1765051 41.0 39.2 41.0 35.8 41.0 25-29 38.7678726 40.4 38.4 41.0 35.0 41.0 30-34 38.0660303 40.0 37.2 41.0 33.8 41.0 35-39 37.046972 38.6 35.0 40.8 32.8 41.0 40-44 36.022234649999994 36.4 35.0 40.0 31.8 41.0 45-49 35.038596749999996 35.0 35.0 38.4 30.8 41.0 50-54 33.6628538 34.8 33.2 35.4 28.8 39.2 55-59 33.9140305 35.0 35.0 35.0 31.0 38.0 60-64 33.57246915 35.0 34.6 35.0 30.6 36.2 65-69 33.243103999999995 35.0 34.0 35.0 29.8 35.0 70-74 32.97007705 35.0 34.0 35.0 29.0 35.0 75-79 32.6954152 35.0 33.2 35.0 29.0 35.0 80-84 32.352695499999996 35.0 33.0 35.0 27.0 35.0 85-89 32.0177168 35.0 33.0 35.0 27.0 35.0 90-94 31.624589050000004 35.0 33.0 35.0 24.4 35.0 95-99 31.017220950000002 35.0 32.8 35.0 23.0 35.0 100-101 29.916448625 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6763.0 3 1055.0 4 1470.0 5 1890.0 6 2412.0 7 3065.0 8 3496.0 9 4147.0 10 4503.0 11 4740.0 12 4993.0 13 5046.0 14 5144.0 15 5406.0 16 5824.0 17 6489.0 18 7242.0 19 8285.0 20 9770.0 21 11211.0 22 13759.0 23 16448.0 24 19751.0 25 24074.0 26 29134.0 27 36187.0 28 43899.0 29 55111.0 30 69761.0 31 88487.0 32 118528.0 33 167332.0 34 274312.0 35 659955.0 36 1398346.0 37 727090.0 38 134537.0 39 20219.0 40 119.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.38405926012044 19.015244487585072 17.611690263442345 28.989005988852146 2 32.142960918204274 22.699905313941894 19.5203575024924 25.636776265361434 3 29.790001593060268 20.381803444416725 20.169069783053246 29.659125179469765 4 31.732324957697717 18.921619799373453 18.817254123283238 30.528801119645593 5 31.648631798893838 19.16370747219877 19.119723451723655 30.06793727718374 6 30.96266595205955 18.427246567005685 17.792840738616583 32.81724674231818 7 32.838243899115476 18.240808094167438 18.306486034795782 30.6144619719213 8 30.394594147834432 18.95542125523767 19.10031031555009 31.54967428137781 9 30.989213836044797 17.97365886768446 18.853232781021962 32.18389451524878 10-14 31.17324692787424 18.821693303515165 18.813436442120928 31.19162332648967 15-19 31.257274503772102 18.614020523322807 18.721768518645504 31.406936454259583 20-24 31.174553483617622 18.663663496121437 18.780570586058083 31.381212434202858 25-29 31.301216854399783 18.765221561698773 18.688234149000664 31.245327434900783 30-34 31.36063647545958 18.617773111714808 18.607657376390694 31.413933036434916 35-39 31.24053896727127 18.697132171909374 18.71854724169398 31.343781619125377 40-44 31.37058369950994 18.724107011935356 18.634881871867893 31.270427416686807 45-49 31.44161291676465 18.554452668946077 18.562616641126738 31.44131777316253 50-54 31.302785523931636 18.654869501944066 18.66815076671666 31.374194207407633 55-59 31.37388820490916 18.726890664634144 18.614993093595047 31.28422803686165 60-64 31.43685943105783 18.58304057491217 18.54617056385117 31.433929430178832 65-69 31.289675 18.666385 18.6785 31.36544 70-74 31.399121279824254 18.71967374393475 18.606033721206742 31.27517125503425 75-79 31.42250199528333 18.6016564352138 18.54416327118451 31.43167829831836 80-84 31.318537678146008 18.687191482451187 18.64528433566469 31.348986503738107 85-89 31.425341997739398 18.71813810269667 18.59116801381761 31.265351885746316 90-94 31.496799417033994 18.54954106027292 18.5106956601653 31.442963862527783 95-99 31.373774736193777 18.65991648657507 18.628680717328493 31.337628059902663 100-101 31.58135339924884 18.76780628116158 18.519157436558043 31.131682883031537 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.37306524897258 2 57.77973718356571 3 59.44912677253002 4 62.261126077343306 5 61.716569076077576 6 63.77991269437773 7 63.45270587103678 8 61.94426842921224 9 63.17310835129357 10-14 62.3648702543639 15-19 62.66421095803169 20-24 62.55576591782048 25-29 62.54654428930056 30-34 62.7745695118945 35-39 62.58432058639664 40-44 62.641011116196744 45-49 62.882930689927186 50-54 62.67697973133928 55-59 62.65811624177081 60-64 62.87078886123666 65-69 62.655114999999995 70-74 62.67429253485851 75-79 62.854180293601694 80-84 62.66752418188412 85-89 62.690693883485714 90-94 62.93976327956178 95-99 62.711402796096436 100-101 62.71303628228038 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 13.0 1 9.5 2 5.5 3 8.0 4 11.5 5 12.5 6 16.5 7 23.0 8 32.0 9 41.5 10 60.5 11 74.5 12 88.0 13 138.0 14 194.5 15 239.0 16 296.5 17 362.0 18 418.5 19 488.0 20 582.5 21 692.5 22 858.0 23 1023.0 24 1207.5 25 1483.0 26 1800.5 27 2189.5 28 2622.5 29 3142.0 30 3765.5 31 4486.5 32 5271.5 33 6107.0 34 7008.0 35 7899.0 36 8690.5 37 9465.0 38 10342.5 39 11269.5 40 12070.0 41 12960.0 42 14170.0 43 15476.5 44 17025.0 45 19410.0 46 22449.0 47 26151.5 48 30740.0 49 36325.5 50 43021.0 51 50696.5 52 59323.0 53 68602.5 54 78091.5 55 88417.0 56 99910.0 57 111021.5 58 122421.0 59 134233.0 60 146128.5 61 158680.5 62 171141.0 63 182683.0 64 192780.5 65 201181.5 66 206179.0 67 207225.5 68 204059.0 69 196004.5 70 183689.0 71 167149.0 72 147446.0 73 125874.0 74 103468.5 75 81242.5 76 60366.0 77 42283.5 78 27620.5 79 16872.0 80 9668.5 81 5195.5 82 2784.5 83 1589.5 84 1002.5 85 683.5 86 474.5 87 361.0 88 285.0 89 223.5 90 168.5 91 120.5 92 98.5 93 83.0 94 70.0 95 52.5 96 42.0 97 30.5 98 17.5 99 13.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.22295 2 0.1965 3 0.1921 4 0.1827 5 0.191025 6 0.17825 7 0.1948 8 0.18225 9 0.184625 10-14 0.143655 15-19 0.10487 20-24 0.07449499999999999 25-29 0.061585 30-34 0.106125 35-39 0.07037 40-44 0.056194999999999995 45-49 0.048655 50-54 0.04717 55-59 0.07826000000000001 60-64 2.9999999999999997E-5 65-69 0.0 70-74 1.9999999999999998E-5 75-79 0.0142 80-84 0.028985000000000004 85-89 7.0E-5 90-94 0.0010299999999999999 95-99 0.01847 100-101 0.0045625 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2767647499625338 #Duplication Level Relative count 1 100.0 2 0.17633857005450465 3 0.008516351394677782 4 0.0015028855402372556 5 0.0015028855402372556 6 5.009618467457518E-4 7 5.009618467457518E-4 8 0.0 9 5.009618467457518E-4 10++ 0.003005771080474511 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 293690 3.2857792 3.820129 1 TTTTT 287400 3.2782505 3.555531 9 GATCG 1284150 3.0827966 4.1883106 1 CGATC 1267885 3.0562537 3.554551 1 >>END_MODULE