##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R1_013.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.648459 34.0 31.0 34.0 31.0 34.0 2 32.89203825 34.0 31.0 34.0 31.0 34.0 3 32.934436 34.0 31.0 34.0 31.0 34.0 4 36.36883625 37.0 37.0 37.0 35.0 37.0 5 36.2900025 37.0 37.0 37.0 35.0 37.0 6 36.25914975 37.0 37.0 37.0 35.0 37.0 7 36.25630675 37.0 37.0 37.0 35.0 37.0 8 36.230849 37.0 37.0 37.0 35.0 37.0 9 38.0118815 39.0 38.0 39.0 35.0 39.0 10-14 38.257908349999994 39.4 38.2 39.4 35.2 39.4 15-19 39.3828038 41.0 39.0 41.0 36.0 41.0 20-24 38.852091 40.4 38.8 41.0 34.8 41.0 25-29 38.450255799999994 40.0 38.0 41.0 34.0 41.0 30-34 36.44540625 39.2 35.4 41.0 28.4 41.0 35-39 36.03695085 37.8 35.0 40.0 29.6 41.0 40-44 35.348607650000005 36.0 34.6 39.4 30.0 41.0 45-49 35.13887545 35.0 35.0 38.4 31.0 41.0 50-54 34.403774850000005 35.0 34.4 36.2 31.0 39.6 55-59 33.762927 35.0 34.0 35.0 30.2 37.8 60-64 33.0690648 35.0 33.2 35.0 27.6 36.0 65-69 32.73032645 35.0 33.0 35.0 28.4 35.0 70-74 32.26763935 35.0 33.0 35.0 25.8 35.0 75-79 32.026719400000005 34.4 32.6 35.0 26.4 35.0 80-84 32.168537050000005 35.0 33.0 35.0 27.0 35.0 85-89 31.4437228 35.0 32.2 35.0 23.4 35.0 90-94 31.2856025 35.0 32.6 35.0 24.0 35.0 95-99 30.9356922 35.0 32.4 35.0 23.0 35.0 100-101 29.521488249999997 34.0 30.5 35.0 10.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 80.0 3 21.0 4 43.0 5 122.0 6 393.0 7 1205.0 8 2697.0 9 4262.0 10 5279.0 11 5463.0 12 5597.0 13 5593.0 14 5998.0 15 6589.0 16 7354.0 17 8327.0 18 8535.0 19 9442.0 20 10572.0 21 11900.0 22 14160.0 23 17749.0 24 22149.0 25 28261.0 26 35148.0 27 44002.0 28 55929.0 29 69021.0 30 87570.0 31 113043.0 32 154168.0 33 230022.0 34 380491.0 35 765823.0 36 1249174.0 37 532168.0 38 92268.0 39 9366.0 40 16.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.62628200047951 19.12929845013664 18.005270630448102 28.23914891893574 2 31.388725 22.466875 20.465 25.6794 3 29.153000000000002 20.58605 20.9873 29.27365 4 31.288149999999998 19.450125 19.48995 29.771775 5 31.435325 19.1814 19.363925000000002 30.01935 6 30.8504 18.557100000000002 18.05725 32.53525 7 32.725875 18.472450000000002 18.4101 30.391575 8 30.310975000000003 19.00205 19.20435 31.482625 9 30.899475 18.063225 18.9895 32.047799999999995 10-14 31.117455 18.885405 18.908455 31.088684999999998 15-19 31.2032 18.61376 18.77338 31.40966 20-24 31.413819346697373 18.66344358211188 18.708058829726504 31.214678241464238 25-29 31.26834085426068 18.750209377617217 18.739504243803047 31.241945524319053 30-34 32.63717925267991 18.499137082594725 18.237635286117555 30.626048378607813 35-39 31.70976049183555 18.609549718889383 18.59448593486684 31.08620385440823 40-44 31.516327193016714 18.693378519924455 18.594294914513327 31.195999372545508 45-49 31.445584999999998 18.551745 18.55367 31.448999999999998 50-54 31.29432 18.624175 18.678829999999998 31.402675000000002 55-59 31.38261 18.678900000000002 18.63842 31.30007 60-64 31.499682101104405 18.59033632367844 18.528576967716145 31.38140460750101 65-69 31.41687287981842 18.69448322227394 18.6471813824279 31.24146251547974 70-74 31.47253 18.731565 18.60411 31.191795 75-79 31.461865 18.5661 18.541645000000003 31.430390000000003 80-84 31.346879231780743 18.642678115234386 18.66865349577371 31.341789157211153 85-89 31.55244197402216 18.75548485204445 18.596271933344806 31.09580124058858 90-94 31.480733876779443 18.51705831401688 18.545742331213486 31.456465477990193 95-99 31.38214541503223 18.60316439987144 18.64461992221102 31.370070262885314 100-101 31.676862500000002 18.6380875 18.5657125 31.1193375 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.86543091941525 2 57.068125 3 58.42665 4 61.05992500000001 5 61.454675 6 63.385650000000005 7 63.11745 8 61.793600000000005 9 62.947275000000005 10-14 62.20614 15-19 62.612860000000005 20-24 62.628497588161615 25-29 62.51028637857973 30-34 63.26322763128772 35-39 62.79596434624377 40-44 62.712326565562215 45-49 62.894585000000006 50-54 62.696995 55-59 62.682680000000005 60-64 62.881086708605416 65-69 62.65833539529816 70-74 62.664325 75-79 62.892255 80-84 62.6886683889919 85-89 62.648243214610744 90-94 62.93719935476963 95-99 62.75221567791755 100-101 62.7962 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5.0 1 4.0 2 4.5 3 9.0 4 11.0 5 10.5 6 12.0 7 12.5 8 16.0 9 23.5 10 32.0 11 46.5 12 69.0 13 92.0 14 107.5 15 128.0 16 153.0 17 195.0 18 250.5 19 314.0 20 396.0 21 491.0 22 622.0 23 791.0 24 1000.0 25 1279.0 26 1620.5 27 2020.0 28 2427.5 29 2953.0 30 3576.5 31 4195.5 32 5037.0 33 5938.5 34 6805.5 35 7560.0 36 8356.0 37 9302.5 38 10060.5 39 11061.5 40 12066.5 41 13035.5 42 14011.0 43 15215.5 44 17256.5 45 19580.5 46 22369.5 47 26090.5 48 30687.5 49 36274.0 50 43018.5 51 50763.5 52 59659.0 53 69100.0 54 78704.5 55 89575.0 56 100483.5 57 111794.5 58 123514.5 59 135224.5 60 147252.0 61 159154.0 62 171749.5 63 183293.5 64 193007.5 65 200713.5 66 205742.5 67 207124.5 68 203984.0 69 196451.5 70 184174.0 71 167818.5 72 148215.0 73 126220.0 74 102970.5 75 80818.5 76 60134.0 77 41605.0 78 27278.0 79 16572.0 80 9245.0 81 4886.0 82 2511.5 83 1333.0 84 764.5 85 475.5 86 317.0 87 221.0 88 162.5 89 119.0 90 84.0 91 63.0 92 48.0 93 31.0 94 19.0 95 14.0 96 10.0 97 6.0 98 1.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0024749999999999998 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 5.55E-4 25-29 0.00125 30-34 0.059960000000000006 35-39 0.025119999999999996 40-44 0.008685 45-49 0.0 50-54 0.0 55-59 0.0 60-64 0.023245000000000002 65-69 0.014459999999999999 70-74 0.0 75-79 0.0 80-84 0.001465 85-89 0.014395 90-94 0.014004999999999998 95-99 0.00126 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.11997120691034943 #Duplication Level Relative count 1 100.0 2 0.09158792440743113 3 5.004804612427931E-4 4 5.004804612427931E-4 5 0.0010009609224855861 6 5.004804612427931E-4 7 0.0 8 5.004804612427931E-4 9 0.0 10++ 0.0015014413837283792 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 288710 3.279384 3.6959217 95-97 AAAAA 291850 3.2786267 3.6880372 1 GATCG 1279640 3.059857 4.261328 1 CGATC 1256445 3.0374591 3.4958193 1 >>END_MODULE