##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R1_004.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.74982275 34.0 31.0 34.0 31.0 34.0 2 32.98280275 34.0 31.0 34.0 31.0 34.0 3 33.0265585 34.0 31.0 34.0 31.0 34.0 4 36.41389975 37.0 37.0 37.0 35.0 37.0 5 36.35672775 37.0 37.0 37.0 35.0 37.0 6 36.3195855 37.0 37.0 37.0 35.0 37.0 7 36.31852175 37.0 37.0 37.0 35.0 37.0 8 36.29105425 37.0 37.0 37.0 35.0 37.0 9 38.07216775 39.0 38.0 39.0 37.0 39.0 10-14 38.329021850000004 39.4 38.4 39.4 35.4 39.4 15-19 39.46417345 41.0 39.4 41.0 36.6 41.0 20-24 39.19098315 40.4 39.0 41.0 35.8 41.0 25-29 38.714389 40.0 38.0 41.0 34.8 41.0 30-34 37.912890499999996 39.8 36.8 41.0 33.2 41.0 35-39 36.8636762 38.4 35.0 40.4 32.2 41.0 40-44 35.8699044 36.2 35.0 39.6 31.0 41.0 45-49 35.2969931 35.0 35.0 38.4 31.4 41.0 50-54 34.46352485 35.0 34.4 36.2 31.0 39.6 55-59 33.833798200000004 35.0 34.0 35.0 30.2 38.0 60-64 33.336441050000005 35.0 33.4 35.0 29.4 36.0 65-69 32.92925565 35.0 33.0 35.0 29.0 35.0 70-74 32.651306999999996 35.0 33.0 35.0 28.2 35.0 75-79 32.0085361 34.4 32.4 35.0 26.4 35.0 80-84 32.23908825 35.0 33.0 35.0 27.0 35.0 85-89 31.964 35.0 33.0 35.0 27.0 35.0 90-94 31.5351401 35.0 33.0 35.0 24.4 35.0 95-99 30.938323200000003 35.0 32.2 35.0 23.0 35.0 100-101 29.593960625 34.0 30.5 35.0 11.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 62.0 3 25.0 4 53.0 5 128.0 6 377.0 7 969.0 8 2272.0 9 3454.0 10 4398.0 11 5052.0 12 5096.0 13 5242.0 14 5472.0 15 6078.0 16 6704.0 17 7585.0 18 8249.0 19 9016.0 20 9598.0 21 11029.0 22 12925.0 23 16057.0 24 20271.0 25 26070.0 26 32633.0 27 40523.0 28 49760.0 29 61555.0 30 77572.0 31 98433.0 32 130058.0 33 182358.0 34 299844.0 35 728975.0 36 1391481.0 37 619871.0 38 109289.0 39 11441.0 40 25.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.59095094321321 19.15093936320452 18.001813501360125 28.25629619222215 2 31.4347 22.40035 20.430675 25.734275 3 29.19115 20.49185 20.933725 29.383274999999998 4 31.307299999999998 19.408 19.478125 29.806575000000002 5 31.443949999999997 19.218025 19.338825 29.9992 6 30.8096 18.573500000000003 18.055 32.5619 7 32.68105 18.479875 18.4192 30.419875 8 30.31105 19.006725 19.168525 31.5137 9 30.927300000000002 18.0428 18.963925 32.065975 10-14 31.115765 18.86684 18.91526 31.102134999999997 15-19 31.199424999999998 18.60917 18.772895000000002 31.418509999999998 20-24 31.13768682612096 18.65771694630168 18.807872847237086 31.39672338034028 25-29 31.262442343651415 18.76844554399158 18.7301700636343 31.238942048722713 30-34 31.356641838129008 18.60620791828047 18.623009334843026 31.414140908747495 35-39 31.260875272702272 18.657753495902433 18.722284385490052 31.35908684590525 40-44 31.357912505841888 18.688880132196388 18.65569503430035 31.297512327661366 45-49 31.407649999999997 18.55486 18.58091 31.456580000000002 50-54 31.282645777702335 18.623630386733012 18.68656628356954 31.40715755199512 55-59 31.36711821655785 18.678234439908817 18.63885430404735 31.315793039485985 60-64 31.424214750244918 18.54295225468821 18.56011274003735 31.472720255029518 65-69 31.304635243504798 18.63943275284497 18.67529185981765 31.380640143832583 70-74 31.41994 18.684505 18.611915 31.283640000000002 75-79 31.453065000000002 18.550775 18.557135 31.439024999999997 80-84 31.32237295638048 18.617025904724148 18.672616536055102 31.38798460284027 85-89 31.41967417956656 18.671800567997096 18.611544206660167 31.296981045776178 90-94 31.476106978807334 18.536446929335078 18.534275821092876 31.453170270764712 95-99 31.393494480191077 18.602340135760517 18.629747662734506 31.374417721313907 100-101 31.690277641665848 18.64332435994616 18.506173537041224 31.16022446134677 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.847247135435346 2 57.168975 3 58.574425 4 61.11387499999999 5 61.44315 6 63.371500000000005 7 63.100925 8 61.824749999999995 9 62.993275000000004 10-14 62.2179 15-19 62.617935 20-24 62.534410206461246 25-29 62.50138439237413 30-34 62.770782746876506 35-39 62.61996211860752 40-44 62.65542483350326 45-49 62.86423 50-54 62.68980332969745 55-59 62.68291125604384 60-64 62.896935005274436 65-69 62.68527538733738 70-74 62.70358 75-79 62.89209 80-84 62.71035755922075 85-89 62.71665522534274 90-94 62.929277249572046 95-99 62.767912201504984 100-101 62.850502103012616 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4.0 1 4.5 2 5.5 3 8.0 4 8.5 5 6.0 6 9.5 7 13.5 8 17.0 9 19.5 10 32.0 11 51.0 12 55.5 13 73.5 14 107.0 15 126.0 16 157.0 17 210.0 18 253.5 19 314.0 20 400.0 21 514.5 22 658.5 23 804.0 24 995.0 25 1298.5 26 1601.0 27 1949.5 28 2493.5 29 3005.5 30 3604.5 31 4395.5 32 5123.5 33 5915.5 34 6812.0 35 7623.5 36 8472.0 37 9375.5 38 10108.5 39 10933.0 40 11864.5 41 12722.0 42 13943.5 43 15443.5 44 17237.5 45 19518.5 46 22454.5 47 26392.5 48 31185.0 49 36779.5 50 43543.0 51 51505.0 52 60050.5 53 69340.0 54 79613.0 55 90006.0 56 100958.5 57 112160.5 58 123353.0 59 135414.5 60 148130.0 61 160256.0 62 171889.0 63 183336.0 64 193521.5 65 200969.5 66 205282.5 67 206391.0 68 202652.0 69 194788.0 70 182838.0 71 166935.0 72 147561.0 73 125399.5 74 102649.0 75 80413.0 76 59885.0 77 41942.5 78 27124.0 79 16449.5 80 9422.5 81 4949.5 82 2573.0 83 1366.0 84 757.5 85 473.5 86 316.0 87 222.5 88 147.5 89 94.0 90 70.0 91 57.0 92 40.0 93 21.5 94 15.0 95 7.5 96 4.0 97 4.0 98 3.5 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 7.500000000000001E-5 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 6.000000000000001E-4 25-29 0.001255 30-34 0.06795 35-39 0.016875 40-44 2.95E-4 45-49 0.0 50-54 0.001425 55-59 3.45E-4 60-64 0.031965 65-69 0.03934 70-74 0.0 75-79 0.0 80-84 0.01013 85-89 0.018855 90-94 0.05104499999999999 95-99 0.00922 100-101 6.000000000000001E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.17397564340991667 #Duplication Level Relative count 1 100.0 2 0.15524839743589744 3 5.00801282051282E-4 4 0.0015024038461538462 5 0.001001602564102564 6 0.0 7 5.00801282051282E-4 8 0.0 9 0.0 10++ 0.0015024038461538462 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 279150 3.149009 3.3823926 10-14 AAAAA 277070 3.115487 3.538714 65-69 GATCG 1281090 3.0739837 4.372169 1 CGATC 1273290 3.0670743 3.5715168 1 >>END_MODULE