##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L003_R1_003.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.79191675 34.0 31.0 34.0 31.0 34.0 2 33.02350475 34.0 31.0 34.0 31.0 34.0 3 33.06904625 34.0 31.0 34.0 31.0 34.0 4 36.46119375 37.0 37.0 37.0 35.0 37.0 5 36.38221375 37.0 37.0 37.0 35.0 37.0 6 36.34786175 37.0 37.0 37.0 35.0 37.0 7 36.3379875 37.0 37.0 37.0 35.0 37.0 8 36.31689625 37.0 37.0 37.0 35.0 37.0 9 38.09399125 39.0 39.0 39.0 37.0 39.0 10-14 38.37007095 39.4 38.4 39.4 36.6 39.4 15-19 39.460155900000004 41.0 39.4 41.0 36.6 41.0 20-24 39.185183849999994 40.6 39.0 41.0 35.8 41.0 25-29 38.64696715 40.0 38.0 41.0 34.8 41.0 30-34 37.81488895 39.8 36.8 41.0 33.2 41.0 35-39 36.697522649999996 38.2 35.0 40.2 31.6 41.0 40-44 35.67855134999999 36.2 35.0 39.6 31.0 41.0 45-49 35.11902905 35.0 35.0 38.4 31.0 41.0 50-54 34.21536435 35.0 34.2 36.2 30.4 39.6 55-59 33.52958355 35.0 33.8 35.0 29.6 38.0 60-64 32.96448905 35.0 33.0 35.0 27.6 36.0 65-69 32.52146995 35.0 33.0 35.0 26.6 35.0 70-74 32.16604134999999 35.0 33.0 35.0 26.0 35.0 75-79 31.47405045 34.4 32.0 35.0 25.0 35.0 80-84 31.611404049999997 35.0 33.0 35.0 24.4 35.0 85-89 31.20069135 35.0 32.6 35.0 23.8 35.0 90-94 30.5908353 34.8 31.4 35.0 20.4 35.0 95-99 29.841228649999998 34.0 31.0 35.0 10.0 35.0 100-101 28.3106295 33.5 28.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 49.0 3 15.0 4 55.0 5 135.0 6 464.0 7 1296.0 8 3045.0 9 4835.0 10 6403.0 11 7163.0 12 7225.0 13 7439.0 14 8033.0 15 8594.0 16 9666.0 17 10565.0 18 11310.0 19 12346.0 20 13440.0 21 15058.0 22 17086.0 23 20401.0 24 24549.0 25 30622.0 26 37146.0 27 45359.0 28 54663.0 29 67493.0 30 83535.0 31 106423.0 32 140219.0 33 196864.0 34 323906.0 35 732078.0 36 1288609.0 37 583762.0 38 108372.0 39 11737.0 40 40.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.593914150063625 19.077946981951463 17.983534053208057 28.344604814776847 2 31.505499999999998 22.388525 20.419124999999998 25.68685 3 29.178700000000003 20.549400000000002 20.939525 29.332375 4 31.282300000000003 19.401925000000002 19.463175 29.852600000000002 5 31.413400000000003 19.2005 19.36425 30.02185 6 30.81435 18.561675 18.08135 32.542624999999994 7 32.627925000000005 18.502850000000002 18.4704 30.398825000000002 8 30.2271 19.034575 19.220925 31.517400000000002 9 30.852325000000004 18.09925 19.00805 32.040375 10-14 31.07691 18.895755 18.9393 31.088035 15-19 31.16968 18.64749 18.778824999999998 31.404005 20-24 31.12344133566029 18.705412089791228 18.82233316546512 31.348813409083366 25-29 31.259638203069446 18.77963211502013 18.756391926774608 31.204337755135818 30-34 31.34810614204068 18.604841284306865 18.656329192803582 31.39072338084887 35-39 31.254295056625487 18.683210025431034 18.714539997497603 31.347954920445876 40-44 31.358769354093702 18.685426145315443 18.664460908408266 31.291343592182592 45-49 31.421725000000002 18.548424999999998 18.569585 31.460265 50-54 31.29713450226316 18.629435299475308 18.679560434813176 31.39386976344836 55-59 31.389974999999996 18.652285 18.643594999999998 31.314145 60-64 31.457580175444765 18.521615949207636 18.55376079999716 31.467043075350443 65-69 31.329873593775332 18.616313589195602 18.650011311770758 31.40380150525831 70-74 31.47051 18.63816 18.58267 31.30866 75-79 31.50025 18.510735 18.508355 31.48066 80-84 31.383813373491638 18.598370012323116 18.613481381413155 31.40433523277209 85-89 31.49159074991242 18.599869424766336 18.562127131068078 31.34641269425316 90-94 31.590588641386113 18.460515240993164 18.474842637511614 31.474053480109106 95-99 31.5187044625757 18.52926723734663 18.54978403359214 31.40224426648553 100-101 31.90148289658274 18.5129883920539 18.378275066934783 31.207253644428572 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.938518964840476 2 57.192350000000005 3 58.511075 4 61.1349 5 61.435249999999996 6 63.356975000000006 7 63.02675 8 61.7445 9 62.892700000000005 10-14 62.164945 15-19 62.573685 20-24 62.47225474474365 25-29 62.46397595820527 30-34 62.73882952288955 35-39 62.60224997707135 40-44 62.650112946276295 45-49 62.88199 50-54 62.69100426571151 55-59 62.704119999999996 60-64 62.92462325079521 65-69 62.73367509903364 70-74 62.77916999999999 75-79 62.98091 80-84 62.788148606263725 85-89 62.83800344416558 90-94 63.06464212149522 95-99 62.92094872906123 100-101 63.10873654101131 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 11.0 1 7.0 2 5.0 3 6.5 4 6.0 5 7.0 6 8.0 7 10.0 8 14.5 9 26.5 10 32.0 11 43.5 12 70.0 13 84.0 14 95.5 15 120.0 16 154.5 17 201.5 18 260.5 19 330.5 20 410.5 21 503.0 22 647.0 23 833.5 24 1062.0 25 1327.5 26 1639.0 27 2041.5 28 2519.0 29 3075.5 30 3640.5 31 4286.0 32 5020.0 33 5939.0 34 6890.5 35 7645.5 36 8565.0 37 9504.5 38 10363.0 39 11167.0 40 12003.0 41 13010.5 42 14159.5 43 15411.5 44 17273.5 45 19765.5 46 22589.5 47 26454.0 48 31275.0 49 36876.5 50 43582.0 51 51540.5 52 60254.5 53 69542.0 54 79459.5 55 89972.0 56 101129.5 57 112243.0 58 123501.5 59 135393.5 60 147099.5 61 159149.0 62 171550.0 63 182784.0 64 192119.5 65 199744.0 66 204586.5 67 205364.0 68 201875.0 69 193591.5 70 181188.5 71 165209.5 72 145695.0 73 124462.0 74 102664.5 75 80666.0 76 60294.0 77 42710.5 78 28508.0 79 18103.5 80 11018.0 81 6404.0 82 3743.0 83 2317.0 84 1500.5 85 1024.0 86 741.5 87 549.5 88 396.0 89 304.5 90 225.0 91 152.0 92 100.5 93 65.5 94 40.0 95 21.0 96 15.5 97 7.5 98 3.5 99 2.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00575 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 9.2E-4 25-29 8.100000000000001E-4 30-34 0.063915 35-39 0.015870000000000002 40-44 0.00113 45-49 0.0 50-54 2.7E-4 55-59 0.0 60-64 0.030645 65-69 0.037755 70-74 0.0 75-79 0.0 80-84 0.00906 85-89 0.019325000000000002 90-94 0.051625 95-99 0.008755 100-101 6.125E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.18995251187202522 #Duplication Level Relative count 1 100.0 2 0.157760304502429 3 0.0035057845444984225 4 0.0020033054539990987 5 0.0 6 0.0 7 5.008263634997747E-4 8 5.008263634997747E-4 9 0.0 10++ 0.0010016527269995493 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 284925 3.223791 3.5886555 90-94 AAAAA 284150 3.2056327 3.6596837 1 GATCG 1274310 3.0576222 4.2839446 1 CGATC 1267105 3.0529625 3.4792445 1 >>END_MODULE