##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_009.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.426705 34.0 31.0 34.0 31.0 34.0 2 32.60157925 34.0 31.0 34.0 31.0 34.0 3 32.6524145 34.0 31.0 34.0 31.0 34.0 4 36.049282 37.0 37.0 37.0 35.0 37.0 5 36.05513225 37.0 37.0 37.0 35.0 37.0 6 36.04755825 37.0 37.0 37.0 35.0 37.0 7 36.0307785 37.0 37.0 37.0 35.0 37.0 8 36.0349585 37.0 37.0 37.0 35.0 37.0 9 37.76206125 39.0 38.0 39.0 35.0 39.0 10-14 37.9711232 39.4 38.2 39.4 35.2 39.4 15-19 39.01624305000001 41.0 39.0 41.0 35.6 41.0 20-24 38.84753615 40.6 38.8 41.0 35.0 41.0 25-29 38.43663375 40.0 38.0 41.0 34.2 41.0 30-34 37.7066593 39.8 36.6 41.0 33.0 41.0 35-39 36.6903791 38.4 35.0 40.6 31.6 41.0 40-44 35.660991550000006 36.2 35.0 39.8 31.0 41.0 45-49 34.74158015 35.0 34.4 38.2 30.0 40.8 50-54 33.4812101 34.8 33.0 35.4 28.2 39.2 55-59 33.6276122 35.0 34.0 35.0 29.8 38.0 60-64 33.274980049999996 35.0 34.0 35.0 29.2 36.2 65-69 32.964015100000005 35.0 33.6 35.0 29.0 35.0 70-74 32.702868550000005 35.0 33.0 35.0 28.6 35.0 75-79 32.4027702 35.0 33.0 35.0 27.0 35.0 80-84 32.08311665 35.0 33.0 35.0 27.0 35.0 85-89 31.757838650000004 35.0 33.0 35.0 24.6 35.0 90-94 31.36936585 35.0 33.0 35.0 24.0 35.0 95-99 30.704099050000004 35.0 31.6 35.0 21.0 35.0 100-101 29.494370000000004 34.0 30.0 35.0 8.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5995.0 3 1273.0 4 1937.0 5 2368.0 6 3054.0 7 3934.0 8 4697.0 9 5284.0 10 5636.0 11 5925.0 12 5986.0 13 5997.0 14 5975.0 15 6141.0 16 6562.0 17 7326.0 18 8199.0 19 9507.0 20 11158.0 21 13287.0 22 16049.0 23 19120.0 24 23569.0 25 28659.0 26 34690.0 27 42249.0 28 51850.0 29 63884.0 30 79362.0 31 100392.0 32 131844.0 33 182604.0 34 294363.0 35 678513.0 36 1338681.0 37 655193.0 38 121180.0 39 17459.0 40 98.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.3783305374965 19.069409340047347 17.604235655254545 28.948024467201606 2 32.04965269984304 22.75400929686951 19.55613040639836 25.6402075968891 3 29.789733595843202 20.35508879721613 20.192554492896473 29.662623114044194 4 31.751258862577693 18.978063290651516 18.800949344760966 30.469728502009826 5 31.64285439057137 19.161388533176805 19.147752208208917 30.04800486804291 6 30.94985429826373 18.46506333912273 17.811593427393927 32.77348893521961 7 32.82062734625885 18.275254191849104 18.30921562836285 30.59490283352919 8 30.368560643577975 18.97516049931118 19.094865922922313 31.56141293418853 9 31.052512048247017 18.006364035645003 18.801843479339645 32.13928043676834 10-14 31.187711024413208 18.877385754565264 18.79314727685518 31.141755944166356 15-19 31.270305866749155 18.62368089853812 18.727536109390556 31.378477125322174 20-24 31.160801037326035 18.695986562367327 18.784017258096856 31.359195142209778 25-29 31.28890725127875 18.809713084157902 18.70864493013766 31.192734734425688 30-34 31.35034657092105 18.640749042684693 18.615058600164446 31.39384578622981 35-39 31.242138404092906 18.708245468315337 18.711610883944164 31.338005243647594 40-44 31.37738884756505 18.739136033203525 18.643895913940856 31.239579205290564 45-49 31.433721584165802 18.58633207794392 18.5724062709434 31.407540066946883 50-54 31.292412432964106 18.68763201084246 18.679205720356073 31.340749835837357 55-59 31.38460849148879 18.71937886220883 18.643334828177586 31.25267781812479 60-64 31.398327849581964 18.608154652038664 18.57197464299366 31.421542855385713 65-69 31.291080711269494 18.70979929057851 18.655789177157274 31.343330820994726 70-74 31.39346 18.75462 18.613455000000002 31.238464999999998 75-79 31.419926993740642 18.61239106374585 18.555590083928948 31.412091858584564 80-84 31.311367824560605 18.69234478960228 18.661258833709137 31.33502855212798 85-89 31.401390000000003 18.72918 18.634335 31.235095 90-94 31.47461888477133 18.58512615107569 18.547106128263678 31.3931488358893 95-99 31.35314287142884 18.674395144908967 18.66366994381145 31.308792039850747 100-101 31.563486028452246 18.742361316764296 18.608941795561993 31.08521085922147 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.32635500469811 2 57.689860296732135 3 59.4523567098874 4 62.22098736458752 5 61.69085925861428 6 63.72334323348334 7 63.41553017978805 8 61.9299735777665 9 63.191792485015355 10-14 62.32946696857956 15-19 62.648782992071325 20-24 62.51999617953581 25-29 62.48164198570444 30-34 62.744192357150865 35-39 62.58014364774049 40-44 62.61696805285561 45-49 62.84126165111268 50-54 62.63316226880147 55-59 62.637286309613586 60-64 62.81987070496767 65-69 62.634411532264224 70-74 62.631925 75-79 62.8320188523252 80-84 62.646396376688585 85-89 62.636485 90-94 62.86776772066063 95-99 62.66193491127958 100-101 62.648696887673715 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 139.0 1 88.0 2 33.0 3 42.0 4 46.0 5 43.0 6 47.5 7 47.5 8 54.5 9 63.5 10 79.0 11 96.5 12 102.5 13 114.0 14 143.5 15 181.5 16 230.0 17 272.5 18 311.5 19 378.5 20 489.5 21 605.0 22 755.0 23 939.5 24 1114.0 25 1403.5 26 1764.5 27 2120.0 28 2552.5 29 3130.0 30 3817.5 31 4498.5 32 5258.5 33 6138.0 34 6965.0 35 7810.0 36 8659.0 37 9425.5 38 10248.5 39 11113.5 40 11970.5 41 12857.5 42 14004.5 43 15299.5 44 17109.0 45 19526.5 46 22284.0 47 26070.5 48 30781.0 49 36474.5 50 43221.0 51 50705.5 52 59163.0 53 68495.5 54 78403.5 55 88980.0 56 99920.0 57 111021.5 58 122675.0 59 134514.5 60 146546.5 61 159326.5 62 171844.5 63 183366.5 64 193437.5 65 201330.0 66 206491.5 67 207333.0 68 203834.5 69 196060.5 70 184081.5 71 167997.0 72 147999.0 73 125680.5 74 102872.0 75 80456.5 76 59697.5 77 41662.5 78 27048.5 79 16534.5 80 9407.0 81 5036.5 82 2650.0 83 1479.0 84 866.0 85 563.5 86 394.5 87 290.0 88 224.5 89 174.0 90 143.5 91 114.5 92 84.0 93 64.0 94 55.0 95 40.5 96 33.5 97 26.0 98 12.0 99 7.5 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11934999999999998 2 0.090025 3 0.06725 4 0.07845 5 0.08305 6 0.018349999999999998 7 0.033675000000000004 8 0.0463 9 0.0477 10-14 0.021935 15-19 0.024274999999999998 20-24 0.01215 25-29 0.013014999999999999 30-34 0.021185 35-39 0.01235 40-44 0.010624999999999999 45-49 0.005795 50-54 0.015315 55-59 0.01188 60-64 2.4999999999999998E-5 65-69 2.0999999999999998E-4 70-74 0.0 75-79 0.001725 80-84 0.003075 85-89 0.0 90-94 5.9999999999999995E-5 95-99 0.001875 100-101 0.0052625 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.18194632583388592 #Duplication Level Relative count 1 100.0 2 0.14822604471819525 3 0.0015022909937654923 4 0.00200305465835399 5 0.0 6 0.0 7 0.0 8 0.0 9 5.007636645884975E-4 10++ 5.007636645884975E-4 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 309530 3.4483483 3.9750621 1 TTTTT 292130 3.3248966 3.5178719 70-74 GATCG 1278605 3.0661945 4.243352 1 CGATC 1267545 3.0545142 3.4545417 1 >>END_MODULE