##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_008.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48884325 34.0 31.0 34.0 31.0 34.0 2 32.65903075 34.0 31.0 34.0 31.0 34.0 3 32.69057625 34.0 31.0 34.0 31.0 34.0 4 36.07364425 37.0 37.0 37.0 35.0 37.0 5 36.07433525 37.0 37.0 37.0 35.0 37.0 6 36.08276975 37.0 37.0 37.0 35.0 37.0 7 36.08449325 37.0 37.0 37.0 35.0 37.0 8 36.08961 37.0 37.0 37.0 35.0 37.0 9 37.8157125 39.0 38.0 39.0 35.0 39.0 10-14 38.0857889 39.4 38.2 39.4 35.2 39.4 15-19 39.185707550000004 41.0 39.0 41.0 36.0 41.0 20-24 38.96434605 41.0 39.0 41.0 35.4 41.0 25-29 38.573442750000005 40.0 38.2 41.0 34.8 41.0 30-34 37.81735345 39.8 36.8 41.0 33.2 41.0 35-39 36.75030495 38.6 35.0 40.6 31.6 41.0 40-44 35.77201525 36.4 35.0 39.8 31.0 41.0 45-49 34.85385755 35.0 34.8 38.4 30.6 40.8 50-54 33.582397549999996 34.8 33.2 35.4 28.4 39.2 55-59 33.7542325 35.0 34.4 35.0 30.0 38.0 60-64 33.39990495 35.0 34.0 35.0 30.0 36.2 65-69 33.129939349999994 35.0 34.0 35.0 29.0 35.0 70-74 32.86777305 35.0 33.6 35.0 29.0 35.0 75-79 32.54770065 35.0 33.0 35.0 27.8 35.0 80-84 32.2662865 35.0 33.0 35.0 27.0 35.0 85-89 32.003469949999996 35.0 33.0 35.0 26.6 35.0 90-94 31.56404 35.0 33.0 35.0 24.4 35.0 95-99 31.01926505 35.0 32.6 35.0 23.0 35.0 100-101 30.0038695 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 7134.0 3 1203.0 4 1651.0 5 2049.0 6 2916.0 7 3647.0 8 4196.0 9 4908.0 10 5296.0 11 5431.0 12 5526.0 13 5442.0 14 5395.0 15 5654.0 16 6018.0 17 6578.0 18 7486.0 19 8480.0 20 10142.0 21 11980.0 22 14508.0 23 17628.0 24 21587.0 25 26179.0 26 32049.0 27 39464.0 28 48026.0 29 59214.0 30 72831.0 31 93681.0 32 124348.0 33 173845.0 34 282589.0 35 669299.0 36 1382350.0 37 687671.0 38 125221.0 39 18289.0 40 89.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.349297979109714 19.065463498120195 17.583413829591095 29.001824693178996 2 32.14890910953078 22.71356484429641 19.486781778584554 25.650744267588255 3 29.7850251360194 20.3988166631493 20.157507872765002 29.6586503280663 4 31.685508218592553 18.9863097326275 18.803190230688504 30.524991818091447 5 31.655718331572402 19.155959369409956 19.13312025171112 30.055202047306523 6 30.95136599302296 18.504304457519343 17.816826349835523 32.72750319962217 7 32.86247901871207 18.2514514062995 18.262353049722247 30.623716525266182 8 30.342601025142447 18.986990423235095 19.08013745250752 31.590271099114943 9 31.050195532088647 17.992854043143367 18.81745294286111 32.13949748190687 10-14 31.18140017057201 18.85604746574159 18.791427916525326 31.17112444716108 15-19 31.257550713343345 18.632733002976135 18.703418830000313 31.40629745368021 20-24 31.195647467334354 18.711141404811 18.747176840839774 31.346034287014874 25-29 31.295895 18.80666 18.676994999999998 31.22045 30-34 31.398524441365083 18.647924293113167 18.582559037746634 31.370992227775112 35-39 31.277355 18.735545000000002 18.677115 31.309985 40-44 31.399715 18.71898 18.617195 31.264110000000002 45-49 31.43546 18.593045 18.528985000000002 31.442510000000002 50-54 31.294416862952705 18.675612723455583 18.66656259856386 31.36340781502785 55-59 31.400940821223067 18.69243430016459 18.617024202131464 31.289600676480877 60-64 31.43668 18.603265 18.52892 31.431134999999998 65-69 31.309715 18.6821 18.664185 31.344 70-74 31.3873 18.73723 18.611575 31.263895 75-79 31.449519999999996 18.603035000000002 18.54172 31.405725 80-84 31.31774 18.684255 18.65577 31.342235000000002 85-89 31.426965000000003 18.70896 18.61092 31.253155 90-94 31.474155 18.60225 18.522155 31.40144 95-99 31.36348 18.657245 18.65137 31.327905 100-101 31.563237500000003 18.7742625 18.537225 31.125275000000002 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.35112267228872 2 57.79965337711903 3 59.4436754640857 4 62.210500036684 5 61.71092037887892 6 63.678869192645124 7 63.486195543978255 8 61.932872124257386 9 63.189693013995516 10-14 62.35252461773308 15-19 62.66384816702355 20-24 62.541681754349234 25-29 62.516344999999994 30-34 62.7695166691402 35-39 62.587340000000005 40-44 62.663824999999996 45-49 62.877970000000005 50-54 62.65782467798056 55-59 62.69054149770395 60-64 62.86781500000001 65-69 62.653715 70-74 62.651195 75-79 62.855245000000004 80-84 62.659975 85-89 62.680119999999995 90-94 62.875595 95-99 62.691385 100-101 62.6885125 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 191.0 1 123.5 2 52.0 3 44.0 4 43.5 5 48.5 6 50.0 7 62.0 8 77.0 9 73.5 10 79.0 11 103.5 12 128.0 13 153.5 14 182.5 15 210.5 16 233.0 17 280.0 18 322.0 19 384.0 20 480.0 21 573.5 22 700.5 23 877.5 24 1088.5 25 1376.0 26 1762.0 27 2167.5 28 2580.0 29 3114.5 30 3680.0 31 4375.0 32 5274.0 33 6095.5 34 6951.0 35 7770.5 36 8531.5 37 9440.5 38 10295.5 39 11113.5 40 12003.5 41 12947.5 42 14022.0 43 15302.0 44 16989.5 45 19407.5 46 22434.0 47 26082.5 48 30495.0 49 36035.5 50 42858.0 51 50551.0 52 59024.5 53 68271.0 54 78106.5 55 88082.5 56 98658.5 57 110086.0 58 122123.5 59 134095.0 60 146220.0 61 159106.5 62 171606.0 63 182715.0 64 192681.5 65 201193.5 66 206563.5 67 207951.0 68 205071.0 69 197329.0 70 184926.5 71 168628.5 72 148628.5 73 126604.5 74 103894.5 75 81091.0 76 60248.0 77 42091.0 78 27395.0 79 16702.5 80 9317.0 81 4900.5 82 2556.0 83 1361.5 84 781.0 85 489.5 86 350.0 87 234.0 88 160.5 89 139.5 90 123.0 91 106.0 92 80.0 93 53.5 94 38.5 95 29.5 96 23.5 97 16.0 98 11.5 99 8.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.20240000000000002 2 0.165275 3 0.138325 4 0.160825 5 0.171275 6 0.007724999999999999 7 0.015075 8 0.02365 9 0.048375 10-14 0.00704 15-19 0.00117 20-24 0.00121 25-29 0.0 30-34 0.00804 35-39 0.0 40-44 0.0 45-49 0.0 50-54 0.00138 55-59 1.3000000000000002E-4 60-64 0.0 65-69 0.0 70-74 0.0 75-79 0.0 80-84 0.0 85-89 0.0 90-94 0.0 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.20043385682725348 #Duplication Level Relative count 1 100.0 2 0.15976761074800291 3 0.005008389051661533 4 0.0 5 0.0 6 5.008389051661533E-4 7 5.008389051661533E-4 8 0.0 9 0.0 10++ 0.002003355620664613 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 315330 3.5223458 3.9275186 10-14 TTTTT 289820 3.3136547 3.6889138 95-97 GATCG 1279640 3.0689461 4.2501197 1 CGATC 1270195 3.0612566 3.488701 1 >>END_MODULE