##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R2_007.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.52403825 34.0 31.0 34.0 31.0 34.0 2 32.706656 34.0 31.0 34.0 31.0 34.0 3 32.71191025 34.0 31.0 34.0 31.0 34.0 4 36.12180175 37.0 37.0 37.0 35.0 37.0 5 36.117031 37.0 37.0 37.0 35.0 37.0 6 36.1242005 37.0 37.0 37.0 35.0 37.0 7 36.12353275 37.0 37.0 37.0 35.0 37.0 8 36.1121295 37.0 37.0 37.0 35.0 37.0 9 37.8492355 39.0 38.0 39.0 35.0 39.0 10-14 38.1241882 39.4 38.4 39.4 35.2 39.4 15-19 39.1743173 41.0 39.0 41.0 35.8 41.0 20-24 38.9123898 41.0 39.0 41.0 35.0 41.0 25-29 38.5612234 40.0 38.2 41.0 34.8 41.0 30-34 37.84949875 40.0 36.8 41.0 33.2 41.0 35-39 36.8112867 38.6 35.0 40.6 32.4 41.0 40-44 35.766080849999994 36.4 35.0 39.8 31.0 41.0 45-49 34.8325042 35.0 34.6 38.4 30.4 40.8 50-54 33.562273 34.8 33.2 35.4 28.4 39.2 55-59 33.754316949999996 35.0 34.2 35.0 30.0 38.0 60-64 33.3677402 35.0 34.0 35.0 30.0 36.2 65-69 33.02877155 35.0 34.0 35.0 29.0 35.0 70-74 32.7618967 35.0 33.0 35.0 29.0 35.0 75-79 32.482647549999996 35.0 33.0 35.0 27.4 35.0 80-84 32.153536 35.0 33.0 35.0 27.0 35.0 85-89 31.832716700000002 35.0 33.0 35.0 25.8 35.0 90-94 31.40035815 35.0 33.0 35.0 24.0 35.0 95-99 30.774368950000003 35.0 32.0 35.0 21.6 35.0 100-101 29.4410145 34.0 30.0 35.0 8.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5273.0 3 1166.0 4 1908.0 5 2291.0 6 3173.0 7 4044.0 8 4578.0 9 5337.0 10 5549.0 11 5871.0 12 5928.0 13 5832.0 14 5864.0 15 6139.0 16 6509.0 17 7334.0 18 8494.0 19 9403.0 20 10883.0 21 12874.0 22 15415.0 23 18208.0 24 22047.0 25 26800.0 26 32355.0 27 39244.0 28 48156.0 29 59067.0 30 73950.0 31 93983.0 32 123454.0 33 174639.0 34 287751.0 35 688597.0 36 1367630.0 37 668851.0 38 123386.0 39 17929.0 40 88.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.41845509200675 19.028176135468634 17.59283629813297 28.96053247439165 2 32.09897250783143 22.713352391285678 19.483873132017333 25.70380196886556 3 29.78391237547703 20.450978536917972 20.10287240747666 29.66223668012834 4 31.734486942664077 18.95805165457508 18.779838338818585 30.527623063942254 5 31.65405848191564 19.136693385153027 19.123324545115203 30.085923587816133 6 30.99972107323016 18.401286815519335 17.768635872984504 32.830356238266 7 32.85568828569642 18.264832072049533 18.27053599349553 30.608943648758526 8 30.363490204506554 18.98226345540244 19.080039500721686 31.574206839369317 9 31.035312804801457 17.98033957102972 18.815830233502 32.16851739066683 10-14 31.18964050390946 18.844119823326874 18.790819571896343 31.175420100867324 15-19 31.340976784830243 18.620266834145045 18.681265812060836 31.35749056896388 20-24 31.194195541193924 18.67564968623939 18.77712120325657 31.353033569310117 25-29 31.310416833868754 18.757751613828304 18.687150453877102 31.244681098425836 30-34 31.38767646282254 18.61672743343277 18.58034089708142 31.41525520666327 35-39 31.278942131813082 18.690717150553816 18.690317108129317 31.34002360950379 40-44 31.403209913297246 18.712925600419332 18.60341775869084 31.280446727592583 45-49 31.470767228222286 18.57565225156853 18.526105138384153 31.427475381825037 50-54 31.319168848006207 18.64365141563265 18.66222253268534 31.3749572036758 55-59 31.398025321491417 18.689331978792232 18.623598366730253 31.289044332986098 60-64 31.45957 18.561825000000002 18.51419 31.464415000000002 65-69 31.311731565586577 18.668855933442796 18.651840932592044 31.367571568378576 70-74 31.42841 18.718485 18.591505 31.2616 75-79 31.46511887907133 18.579341147604687 18.52126111275667 31.434278860567318 80-84 31.335465589161966 18.679257066162048 18.633581584285714 31.351695760390275 85-89 31.435924999999997 18.708895000000002 18.58262 31.27256 90-94 31.507859999999997 18.57939 18.495615 31.417135000000002 95-99 31.392587265922995 18.657775261776393 18.61070523588788 31.33893223641273 100-101 31.593592962704115 18.812406319036096 18.517277297903185 31.0767234203566 >>END_MODULE >>Per base GC content pass #Base %GC 1 63.37898756639839 2 57.80277447669698 3 59.44614905560537 4 62.26211000660633 5 61.73998206973177 6 63.83007731149616 7 63.46463193445494 8 61.93769704387587 9 63.20383019546828 10-14 62.36506060477679 15-19 62.698467353794115 20-24 62.54722911050404 25-29 62.555097932294586 30-34 62.80293166948581 35-39 62.61896574131687 40-44 62.68365664088983 45-49 62.89824261004732 50-54 62.694126051682005 55-59 62.68706965447751 60-64 62.923985 65-69 62.679303133965156 70-74 62.690009999999994 75-79 62.899397739638644 80-84 62.687161349552234 85-89 62.708485 90-94 62.924994999999996 95-99 62.73151950233573 100-101 62.67031638306072 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 60.0 1 43.0 2 23.5 3 17.0 4 15.5 5 21.0 6 27.0 7 35.0 8 38.0 9 39.5 10 50.5 11 59.5 12 79.0 13 99.0 14 112.5 15 153.5 16 197.0 17 236.5 18 290.5 19 361.0 20 444.5 21 561.5 22 696.0 23 870.5 24 1111.5 25 1327.5 26 1646.5 27 2085.5 28 2562.5 29 3114.0 30 3728.5 31 4488.5 32 5260.0 33 6030.5 34 6882.5 35 7714.0 36 8520.0 37 9335.0 38 10062.5 39 10884.0 40 11857.0 41 12863.5 42 13954.5 43 15294.0 44 16995.5 45 19172.5 46 22226.0 47 26065.0 48 30773.0 49 36276.5 50 43030.5 51 50669.5 52 58996.0 53 68344.0 54 78163.5 55 88609.0 56 99310.5 57 110474.0 58 122238.0 59 134296.0 60 146584.0 61 158990.5 62 171041.0 63 183073.5 64 193177.0 65 200910.0 66 206301.0 67 206851.0 68 203670.5 69 196749.5 70 184811.0 71 168807.0 72 148911.0 73 126395.5 74 103736.0 75 81324.5 76 60362.5 77 42377.5 78 27597.0 79 16717.5 80 9605.5 81 5210.0 82 2826.5 83 1559.5 84 954.5 85 659.0 86 449.0 87 324.0 88 257.5 89 203.0 90 159.0 91 133.0 92 103.0 93 83.0 94 66.0 95 49.5 96 39.0 97 28.0 98 20.5 99 14.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.17172500000000002 2 0.137925 3 0.12385 4 0.13372499999999998 5 0.140925 6 0.063375 7 0.06874999999999999 8 0.077775 9 0.08865 10-14 0.037995 15-19 0.022915 20-24 0.011349999999999999 25-29 0.008725 30-34 0.031705 35-39 0.010605 40-44 0.002595 45-49 0.004265 50-54 0.0060149999999999995 55-59 0.005495 60-64 0.0 65-69 4.9999999999999996E-6 70-74 0.0 75-79 5.9999999999999995E-5 80-84 0.0010550000000000002 85-89 0.0 90-94 0.0 95-99 5.5E-5 100-101 0.0013625 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2124065411219024 #Duplication Level Relative count 1 100.0 2 0.15926836719872986 3 0.003505907454060091 4 0.002003375688034338 5 0.001001687844017169 6 0.001001687844017169 7 0.0 8 0.0 9 0.0 10++ 0.002003375688034338 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 300165 3.3591943 3.9245684 1 TTTTT 287520 3.3100247 3.5826037 90-94 GATCG 1282665 3.0757954 4.1487546 1 CGATC 1267635 3.0572448 3.4943702 1 >>END_MODULE