##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_014.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 800503 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.423746069658705 34.0 31.0 34.0 31.0 34.0 2 32.6869230971027 34.0 31.0 34.0 31.0 34.0 3 32.73164372900539 34.0 31.0 34.0 31.0 34.0 4 36.2345737617473 37.0 37.0 37.0 35.0 37.0 5 36.109328759542436 37.0 35.0 37.0 35.0 37.0 6 36.099180140486666 37.0 36.0 37.0 35.0 37.0 7 36.05097669840088 37.0 36.0 37.0 35.0 37.0 8 36.05910034066081 37.0 36.0 37.0 35.0 37.0 9 37.800314302382375 39.0 38.0 39.0 35.0 39.0 10-14 38.047905879178465 39.4 38.2 39.4 35.2 39.4 15-19 39.09069022851882 40.2 38.8 41.0 35.6 41.0 20-24 38.87857084857895 40.0 38.2 41.0 35.0 41.0 25-29 38.36113393703709 40.0 37.8 41.0 33.6 41.0 30-34 37.586839774491786 39.6 36.2 41.0 32.4 41.0 35-39 36.4285922726086 38.0 35.0 40.2 30.8 41.0 40-44 35.26698238482554 36.0 34.6 39.4 29.2 41.0 45-49 34.81810311766477 35.0 34.0 38.2 30.0 40.8 50-54 33.34574061558795 35.0 33.6 35.8 26.0 39.4 55-59 33.1301741530013 35.0 33.0 35.0 26.8 37.4 60-64 32.9585048400818 35.0 33.0 35.0 27.0 35.8 65-69 32.57362283464272 35.0 33.0 35.0 27.0 35.0 70-74 32.170668941902775 35.0 33.0 35.0 26.0 35.0 75-79 31.669132532919928 34.4 32.0 35.0 25.6 35.0 80-84 31.897991138071937 35.0 33.0 35.0 26.6 35.0 85-89 31.608877668166137 35.0 33.0 35.0 24.6 35.0 90-94 31.15184127979533 34.6 31.8 35.0 24.0 35.0 95-99 30.538912158980043 34.0 31.0 35.0 21.0 35.0 100-101 28.996998137421095 33.5 29.0 34.5 8.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6.0 3 1.0 4 8.0 5 30.0 6 77.0 7 255.0 8 589.0 9 800.0 10 1137.0 11 1334.0 12 1347.0 13 1381.0 14 1495.0 15 1553.0 16 1635.0 17 1832.0 18 1874.0 19 2109.0 20 2300.0 21 2572.0 22 3090.0 23 3951.0 24 5026.0 25 6386.0 26 7992.0 27 10059.0 28 12453.0 29 15285.0 30 19086.0 31 24037.0 32 31087.0 33 42396.0 34 69375.0 35 155435.0 36 253155.0 37 100680.0 38 17107.0 39 1564.0 40 4.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.44523432629394 19.372914326693742 18.20312568325127 27.97872566376104 2 31.152787684743217 22.58005279180715 20.6767494937558 25.590410029693828 3 28.90794912698641 20.665631484204305 21.169814479146236 29.256604909663046 4 31.219745584963455 19.52409922261378 19.593680473402348 29.662474719020416 5 31.440481797070092 19.168947524244132 19.394805516031795 29.99576516265398 6 30.680959346810692 18.67713175341004 18.14796446734116 32.493944432438106 7 32.530171654572186 18.539593230756164 18.595058357058 30.335176757613652 8 30.26297215625675 19.014044919257017 19.278503640835826 31.444479283650406 9 30.789391170301673 18.113486145585963 19.08112774093289 32.01599494317948 10-14 31.082157093727318 18.864938669811355 18.980840796349298 31.07206344011203 15-19 31.163805757130202 18.689673867555776 18.805600978384838 31.34091939692918 20-24 31.064211807440785 18.721495642813935 18.832283629238532 31.38200892050675 25-29 31.20102556645632 18.815726584902176 18.78217231305361 31.20107553558789 30-34 31.329293050513535 18.647880351624615 18.674882241756922 31.34794435610493 35-39 31.258033549527404 18.70204081836674 18.77671862039009 31.263207011715764 40-44 31.58239074685037 18.73725815165917 18.60566006710353 31.074691034386937 45-49 31.375347750102122 18.64590138950135 18.573047196575153 31.40570366382137 50-54 31.775270130358134 18.74040602501629 18.584503931531 30.89981991309458 55-59 31.322231147166217 18.758580542483912 18.6343586470007 31.284829663349168 60-64 31.434788768395954 18.602353572598474 18.576142798496118 31.386714860509457 65-69 31.28955131842517 18.690072576911362 18.700816568334158 31.319559536329304 70-74 31.409751118983937 18.781066404498173 18.633559149684636 31.17562332683325 75-79 31.417346343486535 18.581117122609157 18.586888493859487 31.414648040044824 80-84 31.282334438058168 18.68492356661641 18.704386378030758 31.32835561729467 85-89 31.408901653085625 18.718680629554168 18.638880803694676 31.23353691366553 90-94 31.439905047476262 18.595552223888056 18.57488755622189 31.389655172413793 95-99 31.338296046360853 18.64255349449034 18.700267206993605 31.318883252155207 100-101 31.55778304391114 18.71948012687023 18.617669140527894 31.105067688690735 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.42395999005499 2 56.743197714437045 3 58.16455403664945 4 60.88222030398387 5 61.43624695972407 6 63.174903779248794 7 62.86534841218584 8 61.70745143990716 9 62.805386113481156 10-14 62.15422053383934 15-19 62.50472515405938 20-24 62.446220727947534 25-29 62.40210110204421 30-34 62.67723740661846 35-39 62.521240561243175 40-44 62.6570817812373 45-49 62.78105141392349 50-54 62.675090043452705 55-59 62.60706081051539 60-64 62.821503628905404 65-69 62.609110854754476 70-74 62.58537444581719 75-79 62.83199438353135 80-84 62.61069005535283 85-89 62.64243856675116 90-94 62.829560219890055 95-99 62.657179298516056 100-101 62.66285073260187 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2.0 1 1.5 2 1.5 3 1.5 4 1.0 5 3.0 6 2.5 7 2.5 8 4.0 9 3.5 10 4.0 11 4.0 12 6.0 13 11.5 14 20.5 15 27.0 16 32.5 17 44.5 18 53.0 19 71.5 20 95.5 21 106.5 22 121.5 23 161.0 24 226.5 25 289.5 26 346.5 27 429.5 28 514.0 29 609.5 30 756.5 31 902.5 32 1077.5 33 1236.5 34 1390.0 35 1565.5 36 1706.5 37 1887.5 38 2074.0 39 2211.5 40 2415.5 41 2617.5 42 2822.5 43 3162.5 44 3554.5 45 4008.0 46 4594.5 47 5362.5 48 6262.0 49 7429.0 50 8860.5 51 10379.5 52 12044.0 53 13835.5 54 16047.0 55 18174.5 56 20209.0 57 22592.0 58 24874.5 59 27322.5 60 29698.5 61 32009.0 62 34592.0 63 36940.0 64 38699.0 65 40286.0 66 41246.0 67 41281.5 68 40840.5 69 39175.5 70 36615.0 71 33266.5 72 29148.0 73 24739.5 74 20133.0 75 15682.5 76 11480.5 77 7991.0 78 5299.5 79 3173.5 80 1725.5 81 882.5 82 420.0 83 220.0 84 135.0 85 79.0 86 47.0 87 39.0 88 30.0 89 18.5 90 13.0 91 8.5 92 9.5 93 4.5 94 0.5 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012741988474746502 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.006895664351039284 25-29 0.001099308809585973 30-34 0.06983109369983623 35-39 0.033129170034340905 40-44 0.02341028078595583 45-49 0.0 50-54 7.495287338086178E-5 55-59 0.0 60-64 0.008594596147672152 65-69 0.006945632933293192 70-74 0.0 75-79 0.0 80-84 2.498429112695393E-4 85-89 0.0 90-94 0.012866909930381271 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 800503.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.08397312859883514 #Duplication Level Relative count 1 100.0 2 0.05102653379757474 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0010005202705406812 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 57105 3.1934369 3.6774724 90-94 AAAAA 57660 3.174829 3.4923413 80-84 GATCG 255140 3.0534055 4.213876 1 CGATC 253075 3.0477965 3.6505299 1 >>END_MODULE