##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_006.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.828419 34.0 31.0 34.0 31.0 34.0 2 33.054197 34.0 31.0 34.0 31.0 34.0 3 33.07807925 34.0 33.0 34.0 31.0 34.0 4 36.46227325 37.0 37.0 37.0 35.0 37.0 5 36.39676475 37.0 37.0 37.0 35.0 37.0 6 36.3533395 37.0 37.0 37.0 35.0 37.0 7 36.3532485 37.0 37.0 37.0 35.0 37.0 8 36.3392825 37.0 37.0 37.0 35.0 37.0 9 38.12956325 39.0 39.0 39.0 37.0 39.0 10-14 38.3970593 39.4 38.8 39.4 37.0 39.4 15-19 39.54591565 41.0 40.0 41.0 37.0 41.0 20-24 39.307501200000004 41.0 39.0 41.0 36.0 41.0 25-29 38.8456506 40.0 38.2 41.0 35.0 41.0 30-34 38.097763099999995 40.0 37.0 41.0 33.6 41.0 35-39 37.036868850000005 38.6 35.0 40.6 32.6 41.0 40-44 36.14969425 36.6 35.0 40.0 32.0 41.0 45-49 35.444978000000006 35.0 35.0 38.4 32.0 41.0 50-54 34.60923265 35.0 35.0 36.2 31.2 39.6 55-59 33.99056169999999 35.0 34.2 35.0 31.0 38.0 60-64 33.521477399999995 35.0 34.0 35.0 30.2 36.2 65-69 33.167930150000004 35.0 33.2 35.0 29.4 35.0 70-74 32.898357950000005 35.0 33.0 35.0 29.0 35.0 75-79 32.24075995 34.4 32.6 35.0 27.6 35.0 80-84 32.54830125 35.0 33.0 35.0 28.6 35.0 85-89 32.23472890000001 35.0 33.0 35.0 27.0 35.0 90-94 31.84867455 35.0 33.0 35.0 26.6 35.0 95-99 31.320695999999998 35.0 33.0 35.0 24.2 35.0 100-101 30.12547675 34.0 31.0 35.0 21.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 74.0 3 13.0 4 40.0 5 108.0 6 292.0 7 928.0 8 2038.0 9 3114.0 10 3869.0 11 4413.0 12 4509.0 13 4637.0 14 5110.0 15 5553.0 16 6329.0 17 6807.0 18 7460.0 19 8126.0 20 8747.0 21 9877.0 22 11787.0 23 14203.0 24 18232.0 25 23046.0 26 28957.0 27 36697.0 28 44975.0 29 56059.0 30 70414.0 31 90251.0 32 118766.0 33 165532.0 34 274169.0 35 694530.0 36 1451372.0 37 682758.0 38 122053.0 39 14121.0 40 34.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.65234895436048 19.079224191403522 17.96244363157067 28.305983222665326 2 31.535200000000003 22.3482 20.3955 25.721100000000003 3 29.224075 20.485049999999998 20.92645 29.364425 4 31.306424999999997 19.3512 19.476474999999997 29.8659 5 31.474200000000003 19.1574 19.310550000000003 30.057850000000002 6 30.851475 18.533 18.04765 32.567875 7 32.63555 18.480475 18.41025 30.473725 8 30.332725 19.00495 19.199125 31.4632 9 30.928375000000003 18.0683 18.953924999999998 32.0494 10-14 31.120519128986345 18.859655833346086 18.905270920014747 31.114554117652826 15-19 31.210559999999997 18.594385 18.776535 31.41852 20-24 31.137085 18.66433 18.798755 31.39983 25-29 31.259453625096768 18.7342810434672 18.739111298987716 31.267154032448317 30-34 31.374785416072076 18.570827891870962 18.622415581563402 31.431971110493556 35-39 31.246122736684654 18.65716228208249 18.722154029340803 31.374560951892054 40-44 31.37893371875218 18.679247113233718 18.651586717690062 31.29023245032404 45-49 31.41431 18.55489 18.569654999999997 31.461145000000002 50-54 31.29266 18.618555 18.69772 31.391065 55-59 31.389899999999997 18.645735 18.648925 31.31544 60-64 31.446586495882332 18.52427207193382 18.54853158894234 31.480609843241503 65-69 31.31371970868418 18.61505691942598 18.66287929090242 31.408344080987415 70-74 31.405655 18.662785 18.615209999999998 31.31635 75-79 31.44582 18.53135 18.538025 31.484804999999998 80-84 31.324752983293973 18.610556123668687 18.667499110328336 31.397191782709005 85-89 31.401383113910843 18.65293735655915 18.62412415055808 31.321555378971933 90-94 31.487063083152773 18.519530340152606 18.524112719323874 31.469293857370744 95-99 31.39763794785675 18.559208301322446 18.631088713200107 31.4120650376207 100-101 31.63689828114793 18.646506182472375 18.530579356624866 31.186016179754834 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.95833217702581 2 57.2563 3 58.588499999999996 4 61.17232500000001 5 61.532050000000005 6 63.419349999999994 7 63.109275 8 61.795925 9 62.977775 10-14 62.235073246639175 15-19 62.62908 20-24 62.53691500000001 25-29 62.526607657545085 30-34 62.806756526565636 35-39 62.620683688576705 40-44 62.66916616907622 45-49 62.875455 50-54 62.683725 55-59 62.70534 60-64 62.92719633912384 65-69 62.7220637896716 70-74 62.722005 75-79 62.93062499999999 80-84 62.72194476600298 85-89 62.722938492882776 90-94 62.95635694052352 95-99 62.80970298547744 100-101 62.82291446090276 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 9.0 1 5.0 2 4.5 3 10.0 4 12.0 5 11.5 6 12.0 7 15.5 8 19.5 9 25.5 10 30.5 11 38.5 12 58.0 13 75.0 14 99.0 15 126.0 16 147.0 17 184.5 18 246.0 19 305.5 20 395.0 21 517.5 22 639.0 23 771.5 24 996.5 25 1349.5 26 1664.5 27 2027.5 28 2444.0 29 2972.0 30 3618.5 31 4265.0 32 5020.0 33 5830.0 34 6770.5 35 7641.5 36 8464.0 37 9280.5 38 10005.5 39 10918.5 40 11806.5 41 12776.5 42 14043.0 43 15372.0 44 17195.0 45 19632.0 46 22495.5 47 26137.0 48 30945.5 49 36697.0 50 43315.5 51 51070.5 52 59831.0 53 69133.5 54 79122.5 55 89829.0 56 100682.0 57 111953.5 58 123738.5 59 135408.5 60 147281.5 61 159524.5 62 171636.0 63 182867.0 64 192884.0 65 200854.0 66 205763.5 67 207052.5 68 204173.5 69 196128.0 70 183176.0 71 166899.5 72 147386.5 73 125869.0 74 103478.0 75 80669.0 76 59769.0 77 42053.0 78 27367.0 79 16515.0 80 9374.5 81 4988.0 82 2599.5 83 1376.5 84 731.5 85 437.5 86 275.5 87 196.5 88 148.5 89 103.5 90 72.0 91 53.5 92 39.5 93 23.5 94 15.0 95 9.0 96 3.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.004975 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 1.9E-4 15-19 0.0 20-24 0.0 25-29 0.0052899999999999996 30-34 0.053675 35-39 0.018075 40-44 0.00143 45-49 0.0 50-54 0.0 55-59 0.0 60-64 0.03923 65-69 0.036325 70-74 0.0 75-79 0.0 80-84 0.005245 85-89 0.02848 90-94 0.05192000000000001 95-99 0.014485 100-101 0.001575 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.17395651087227743 #Duplication Level Relative count 1 100.0 2 0.14271264183633614 3 0.0030044766702386557 4 0.0015022383351193278 5 5.007461117064426E-4 6 0.0 7 0.0 8 0.0 9 5.007461117064426E-4 10++ 0.0010014922234128853 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 277215 3.1182523 3.48722 10-14 AAAAA 272865 3.0851812 3.360679 1 GATCG 1279125 3.0699368 4.2929792 1 CGATC 1272665 3.0653272 3.5106328 1 >>END_MODULE